ENCFF001RMK

Library Details

Organism: Homo Sapiens
Biosample: heart (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFT
Description: Part of ENCODE experiment ENCSR000AFT. The libraries contained in this experiment come from human fetal heart tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000582588.1 ENST00000582588.1_258_320_+ 258–320 29152.01 59.19 50.59 64.89 RPL17-214 retained intron heart (Tissue)
ENST00000583861.1 ENST00000583861.1_27_62_+ 27–62 675.00 0.11 1.17 100.0 SNORD43-201 snoRNA heart (Tissue)
ENST00000583861.1 ENST00000583861.1_1_62_+ 1–62 590773.00 98.91 1025.22 99.95 SNORD43-201 snoRNA heart (Tissue)
ENST00000583861.1 ENST00000583861.1_12_62_+ 12–62 563.00 0.09 0.98 100.0 SNORD43-201 snoRNA heart (Tissue)
ENST00000584249.1 ENST00000584249.1_60_79_+ 60–79 1669.00 59.00 2.90 100.0 MIR151B-201 miRNA heart (Tissue)
ENST00000584923.1 ENST00000584923.1_153_216_+ 153–216 383.00 3.38 0.66 100.0 SNORD3A-201 snoRNA heart (Tissue)
ENST00000585078.1 ENST00000585078.1_1_83_+ 1–83 12086.00 87.20 20.97 100.0 SNORD92-201 snoRNA heart (Tissue)
ENST00000585881.5 ENST00000585881.5_140_162_+ 140–162 19215.00 66.75 33.35 100.0 NSRP1-214 protein coding heart (Tissue)
ENST00000585881.5 ENST00000585881.5_104_126_+ 104–126 6751.00 23.45 11.72 84.83 NSRP1-214 protein coding heart (Tissue)
ENST00000587762.2 ENST00000587762.2_6337_6420_+ 6337–6420 479.00 0.67 0.83 100.0 MIR23AHG-201 lncRNA heart (Tissue)
ENST00000587762.2 ENST00000587762.2_6314_6334_+ 6314–6334 15044.00 20.92 26.11 94.41 MIR23AHG-201 lncRNA heart (Tissue)
ENST00000587762.2 ENST00000587762.2_6462_6481_+ 6462–6481 25117.00 34.93 43.59 91.57 MIR23AHG-201 lncRNA heart (Tissue)
ENST00000587762.2 ENST00000587762.2_6619_6638_+ 6619–6638 13121.00 18.25 22.77 88.61 MIR23AHG-201 lncRNA heart (Tissue)
ENST00000587762.2 ENST00000587762.2_6619_6641_+ 6619–6641 8471.00 11.78 14.70 69.35 MIR23AHG-201 lncRNA heart (Tissue)
ENST00000590797.5 ENST00000590797.5_2254_2275_+ 2254–2275 103.00 32.29 0.18 100.0 MIR122HG-201 lncRNA heart (Tissue)
ENST00000591345.5 ENST00000591345.5_1414_1429_+ 1414–1429 70.00 55.56 0.12 100.0 ODAD3-204 nonsense mediated decay heart (Tissue)
ENST00000592790.1 ENST00000592790.1_3381_3401_+ 3381–3401 1770.00 1.30 3.07 100.0 VMP1-217 retained intron heart (Tissue)
ENST00000592790.1 ENST00000592790.1_3343_3402_+ 3343–3402 172.00 0.13 0.30 100.0 VMP1-217 retained intron heart (Tissue)
ENST00000592790.1 ENST00000592790.1_3343_3366_+ 3343–3366 68081.00 50.16 118.15 54.89 VMP1-217 retained intron heart (Tissue)
ENST00000595794.5 ENST00000595794.5_236_279_+ 236–279 395.00 0.07 0.69 100.0 C19orf48P-203 retained intron heart (Tissue)
ENST00000595794.5 ENST00000595794.5_236_318_+ 236–318 413035.41 78.33 716.78 85.44 C19orf48P-203 retained intron heart (Tissue)
ENST00000595794.5 ENST00000595794.5_236_320_+ 236–320 111753.94 21.19 193.94 21.91 C19orf48P-203 retained intron heart (Tissue)
ENST00000595794.5 ENST00000595794.5_236_330_+ 236–330 8544.00 1.62 14.83 93.3 C19orf48P-203 retained intron heart (Tissue)
ENST00000595794.5 ENST00000595794.5_236_276_+ 236–276 67.00 0.01 0.12 100.0 C19orf48P-203 retained intron heart (Tissue)
ENST00000595794.5 ENST00000595794.5_230_318_+ 230–318 6.00 0.00 0.01 100.0 C19orf48P-203 retained intron heart (Tissue)