ENCFF001RMK

Library Details

Organism: Homo Sapiens
Biosample: heart (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFT
Description: Part of ENCODE experiment ENCSR000AFT. The libraries contained in this experiment come from human fetal heart tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000499525.1 ENST00000499525.1_506_558_+ 506–558 41.00 3.12 0.07 100.0 ZBED9-AS1-201 lncRNA heart (Tissue)
ENST00000507485.1 ENST00000507485.1_1149_1210_+ 1149–1210 18433.00 90.37 31.99 100.0 RPS3A-206 retained intron heart (Tissue)
ENST00000509578.1 ENST00000509578.1_1330_1389_+ 1330–1389 169490.00 96.24 294.13 100.0 COX7C-203 protein coding heart (Tissue)
ENST00000513027.3 ENST00000513027.3_241_306_+ 241–306 93328.52 60.64 161.96 67.32 RACK1-229 protein coding heart (Tissue)
ENST00000513027.3 ENST00000513027.3_272_305_+ 272–305 6805.00 4.42 11.81 87.46 RACK1-229 protein coding heart (Tissue)
ENST00000513027.3 ENST00000513027.3_263_305_+ 263–305 567.00 0.37 0.98 100.0 RACK1-229 protein coding heart (Tissue)
ENST00000513027.3 ENST00000513027.3_241_308_+ 241–308 44873.81 29.16 77.87 37.8 RACK1-229 protein coding heart (Tissue)
ENST00000513060.5 ENST00000513060.5_712_783_+ 712–783 122292.00 60.14 212.22 90.52 RACK1-230 retained intron heart (Tissue)
ENST00000513060.5 ENST00000513060.5_713_786_+ 713–786 77030.00 37.88 133.68 66.56 RACK1-230 retained intron heart (Tissue)
ENST00000515961.1 ENST00000515961.1_38_58_+ 38–58 10.00 11.49 0.02 100.0 RNA5SP486-201 rRNA pseudogene heart (Tissue)
ENST00000516201.1 ENST00000516201.1_1_30_+ 1–30 2179.00 81.86 3.78 100.0 SCARNA5-201 scaRNA heart (Tissue)
ENST00000516507.1 ENST00000516507.1_1_26_+ 1–26 1491.00 0.48 2.59 100.0 RNY4-201 misc RNA heart (Tissue)
ENST00000516507.1 ENST00000516507.1_1_90_+ 1–90 27755.00 8.85 48.17 100.0 RNY4-201 misc RNA heart (Tissue)
ENST00000516507.1 ENST00000516507.1_15_32_+ 15–32 1080.00 0.34 1.87 100.0 RNY4-201 misc RNA heart (Tissue)
ENST00000516507.1 ENST00000516507.1_41_93_+ 41–93 1918.00 0.61 3.33 100.0 RNY4-201 misc RNA heart (Tissue)
ENST00000516507.1 ENST00000516507.1_1_36_+ 1–36 8720.00 2.78 15.13 48.9 RNY4-201 misc RNA heart (Tissue)
ENST00000516507.1 ENST00000516507.1_1_32_+ 1–32 190224.00 60.66 330.11 95.43 RNY4-201 misc RNA heart (Tissue)
ENST00000516507.1 ENST00000516507.1_48_93_+ 48–93 7657.00 2.44 13.29 92.2 RNY4-201 misc RNA heart (Tissue)
ENST00000516507.1 ENST00000516507.1_1_17_+ 1–17 62.00 0.02 0.11 100.0 RNY4-201 misc RNA heart (Tissue)
ENST00000516507.1 ENST00000516507.1_1_39_+ 1–39 4126.00 1.32 7.16 73.76 RNY4-201 misc RNA heart (Tissue)
ENST00000516507.1 ENST00000516507.1_67_93_+ 67–93 15068.00 4.81 26.15 64.96 RNY4-201 misc RNA heart (Tissue)
ENST00000516507.1 ENST00000516507.1_1_48_+ 1–48 1278.00 0.41 2.22 100.0 RNY4-201 misc RNA heart (Tissue)
ENST00000516507.1 ENST00000516507.1_54_93_+ 54–93 618.00 0.20 1.07 40.9 RNY4-201 misc RNA heart (Tissue)
ENST00000517927.2 ENST00000517927.2_384_405_+ 384–405 1964.00 77.66 3.41 84.69 MIR3142HG-201 lncRNA heart (Tissue)
ENST00000521127.2 ENST00000521127.2_334_410_+ 334–410 16062.00 70.83 27.87 100.0 SNHG6-204 retained intron heart (Tissue)