ENCFF001RMK

Library Details

Organism: Homo Sapiens
Biosample: heart (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFT
Description: Part of ENCODE experiment ENCSR000AFT. The libraries contained in this experiment come from human fetal heart tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000521276.3 ENST00000521276.3_47_68_+ 47–68 56896.00 36.76 98.74 86.07 MIR151A-201 miRNA heart (Tissue)
ENST00000521276.3 ENST00000521276.3_11_31_+ 11–31 85101.00 54.99 147.68 100.0 MIR151A-201 miRNA heart (Tissue)
ENST00000523308.5 ENST00000523308.5_614_626_+ 614–626 2932.00 95.44 5.09 100.0 DENND3-221 protein coding heart (Tissue)
ENST00000525239.5 ENST00000525239.5_22_116_+ 22–116 178.00 0.05 0.31 100.0 WDR74-204 protein coding heart (Tissue)
ENST00000525239.5 ENST00000525239.5_155_187_+ 155–187 570.00 0.15 0.99 100.0 WDR74-204 protein coding heart (Tissue)
ENST00000525239.5 ENST00000525239.5_78_116_+ 78–116 44.00 0.01 0.08 100.0 WDR74-204 protein coding heart (Tissue)
ENST00000525239.5 ENST00000525239.5_93_116_+ 93–116 46.00 0.01 0.08 82.14 WDR74-204 protein coding heart (Tissue)
ENST00000525239.5 ENST00000525239.5_50_116_+ 50–116 5.00 0.00 0.01 100.0 WDR74-204 protein coding heart (Tissue)
ENST00000525239.5 ENST00000525239.5_90_116_+ 90–116 17.00 0.00 0.03 51.52 WDR74-204 protein coding heart (Tissue)
ENST00000525239.5 ENST00000525239.5_93_187_+ 93–187 1138.00 0.30 1.97 73.32 WDR74-204 protein coding heart (Tissue)
ENST00000525239.5 ENST00000525239.5_88_116_+ 88–116 16.00 0.00 0.03 48.48 WDR74-204 protein coding heart (Tissue)
ENST00000527983.5 ENST00000527983.5_1320_1408_+ 1320–1408 14403.00 80.25 24.99 100.0 HSPA8-211 retained intron heart (Tissue)
ENST00000530422.1 ENST00000530422.1_78_109_+ 78–109 1159.00 19.57 2.01 100.0 SCARNA9-201 lncRNA heart (Tissue)
ENST00000530769.5 ENST00000530769.5_2551_2618_+ 2551–2618 71024.00 95.68 123.25 100.0 TAF1D-215 retained intron heart (Tissue)
ENST00000530769.5 ENST00000530769.5_2550_2623_+ 2550–2623 249.00 0.34 0.43 100.0 TAF1D-215 retained intron heart (Tissue)
ENST00000532091.1 ENST00000532091.1_1133_1221_+ 1133–1221 11277.00 71.65 19.57 100.0 HSPA8-215 retained intron heart (Tissue)
ENST00000532091.1 ENST00000532091.1_1128_1221_+ 1128–1221 155.00 0.98 0.27 100.0 HSPA8-215 retained intron heart (Tissue)
ENST00000532091.1 ENST00000532091.1_1164_1221_+ 1164–1221 1494.00 9.49 2.59 100.0 HSPA8-215 retained intron heart (Tissue)
ENST00000533872.5 ENST00000533872.5_427_507_+ 427–507 1023.00 37.29 1.78 100.0 RPS2-215 retained intron heart (Tissue)
ENST00000548801.1 ENST00000548801.1_2334_2355_+ 2334–2355 106816.00 83.09 185.37 83.96 ENST00000548801 lncRNA heart (Tissue)
ENST00000554988.2 ENST00000554988.2_275_368_+ 275–368 813.00 17.11 1.41 100.0 ENST00000554988 lncRNA heart (Tissue)
ENST00000554988.2 ENST00000554988.2_275_334_+ 275–334 1260.00 26.52 2.19 100.0 ENST00000554988 lncRNA heart (Tissue)
ENST00000554988.2 ENST00000554988.2_275_320_+ 275–320 31.00 0.65 0.05 100.0 ENST00000554988 lncRNA heart (Tissue)
ENST00000557108.6 ENST00000557108.6_4525_4590_+ 4525–4590 1212.00 1.09 2.10 100.0 SNHG14-220 retained intron heart (Tissue)
ENST00000557108.6 ENST00000557108.6_4551_4587_+ 4551–4587 3377.00 3.04 5.86 100.0 SNHG14-220 retained intron heart (Tissue)