ENCFF001RMJ

Library Details

Organism: Homo Sapiens
Biosample: skin of body (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGA
Description: Part of ENCODE experiment ENCSR000AGA. The libraries contained in this experiment come from human fetal skin tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR1-16678271 tRNA-transcript-chr1-16678271_14_32_+ 14–32 5101.00 11.78 13.26 100.0 TRNA-TRANSCRIPT-CHR1-16678271 Gly tRNA skin of body (Tissue)
TRNA-TRANSCRIPT-CHR1-16727285 tRNA-transcript-chr1-16727285_2_32_+ 2–32 10513.00 30.08 27.33 100.0 TRNA-TRANSCRIPT-CHR1-16727285 Gly tRNA skin of body (Tissue)
TRNA-TRANSCRIPT-CHR1-167715488 tRNA-transcript-chr1-167715488_8_31_+ 8–31 53.00 0.20 0.14 100.0 TRNA-TRANSCRIPT-CHR1-167715488 Pro tRNA skin of body (Tissue)
TRNA-TRANSCRIPT-CHR1-16861921 tRNA-transcript-chr1-16861921_18_53_+ 18–53 58.00 0.00 0.15 100.0 TRNA-TRANSCRIPT-CHR1-16861921 Gly tRNA skin of body (Tissue)
TRNA-TRANSCRIPT-CHR1-16861921 tRNA-transcript-chr1-16861921_1_35_+ 1–35 1208.00 0.02 3.14 12.89 TRNA-TRANSCRIPT-CHR1-16861921 Gly tRNA skin of body (Tissue)
TRNA-TRANSCRIPT-CHR11-76235825 tRNA-transcript-chr11-76235825_1_32_+ 1–32 4015.00 41.47 10.44 87.64 TRNA-TRANSCRIPT-CHR11-76235825 Pro tRNA skin of body (Tissue)
TRNA-TRANSCRIPT-CHR11-76235825 tRNA-transcript-chr11-76235825_3_32_+ 3–32 1676.00 17.31 4.36 29.45 TRNA-TRANSCRIPT-CHR11-76235825 Pro tRNA skin of body (Tissue)
TRNA-TRANSCRIPT-CHR12-124939966 tRNA-transcript-chr12-124939966_1_53_+ 1–53 220.00 4.27 0.57 100.0 TRNA-TRANSCRIPT-CHR12-124939966 Ala tRNA skin of body (Tissue)
TRNA-TRANSCRIPT-CHR1-248874248 tRNA-transcript-chr1-248874248_1_33_+ 1–33 558166.00 74.63 1451.29 93.69 TRNA-TRANSCRIPT-CHR1-248874248 Glu tRNA skin of body (Tissue)
TRNA-TRANSCRIPT-CHR1-248874248 tRNA-transcript-chr1-248874248_1_39_+ 1–39 1289.00 0.17 3.35 100.0 TRNA-TRANSCRIPT-CHR1-248874248 Glu tRNA skin of body (Tissue)
TRNA-TRANSCRIPT-CHR12-98503503 tRNA-transcript-chr12-98503503_1_33_+ 1–33 3933.00 48.42 10.23 100.0 TRNA-TRANSCRIPT-CHR12-98503503 Asp tRNA skin of body (Tissue)
TRNA-TRANSCRIPT-CHR1-54957869 tRNA-transcript-chr1-54957869_16_32_+ 16–32 149.00 0.96 0.39 100.0 TRNA-TRANSCRIPT-CHR1-54957869 Lys tRNA skin of body (Tissue)
TRNA-TRANSCRIPT-CHR15-65869062 tRNA-transcript-chr15-65869062_8_33_+ 8–33 17.00 0.29 0.04 100.0 TRNA-TRANSCRIPT-CHR15-65869062 Gln tRNA skin of body (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_16_32_+ 16–32 205.00 0.29 0.53 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA skin of body (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_55_+ 1–55 263.00 0.38 0.68 67.96 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA skin of body (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_41_+ 1–41 182.00 0.26 0.47 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA skin of body (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_4_33_+ 4–33 650.00 0.93 1.69 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA skin of body (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_52_+ 1–52 300.00 0.43 0.78 97.72 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA skin of body (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_29_+ 1–29 369.00 0.53 0.96 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA skin of body (Tissue)
TRNA-TRANSCRIPT-CHR16-3158922 tRNA-transcript-chr16-3158922_31_53_+ 31–53 708.00 2.52 1.84 100.0 TRNA-TRANSCRIPT-CHR16-3158922 Pro tRNA skin of body (Tissue)
TRNA-TRANSCRIPT-CHR16-3158922 tRNA-transcript-chr16-3158922_3_32_+ 3–32 7518.00 26.80 19.55 37.82 TRNA-TRANSCRIPT-CHR16-3158922 Pro tRNA skin of body (Tissue)
TRNA-TRANSCRIPT-CHR16-3172048 tRNA-transcript-chr16-3172048_32_53_+ 32–53 554.00 1.98 1.44 100.0 TRNA-TRANSCRIPT-CHR16-3172048 Pro tRNA skin of body (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_1_13_+ 1–13 227.00 0.08 0.59 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA skin of body (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_1_34_+ 1–34 225273.00 81.09 585.73 88.56 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA skin of body (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_1_41_+ 1–41 140.00 0.05 0.36 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA skin of body (Tissue)