ENCFF001RMJ

Library Details

Organism: Homo Sapiens
Biosample: skin of body (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGA
Description: Part of ENCODE experiment ENCSR000AGA. The libraries contained in this experiment come from human fetal skin tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_13_25_+ 13–25 149.00 0.05 0.39 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA skin of body (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_47_73_+ 47–73 5.00 0.00 0.01 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA skin of body (Tissue)
TRNA-TRANSCRIPT-CHR16-3182635 tRNA-transcript-chr16-3182635_31_53_+ 31–53 420.00 1.55 1.09 100.0 TRNA-TRANSCRIPT-CHR16-3182635 Pro tRNA skin of body (Tissue)
TRNA-TRANSCRIPT-CHR16-3191501 tRNA-transcript-chr16-3191501_1_33_+ 1–33 25614.00 37.56 66.60 48.37 TRNA-TRANSCRIPT-CHR16-3191501 Lys tRNA skin of body (Tissue)
TRNA-TRANSCRIPT-CHR16-3191989 tRNA-transcript-chr16-3191989_31_53_+ 31–53 70.00 0.26 0.18 100.0 TRNA-TRANSCRIPT-CHR16-3191989 Pro tRNA skin of body (Tissue)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_1_52_+ 1–52 293.00 1.80 0.76 100.0 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA skin of body (Tissue)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_1_35_+ 1–35 1343.00 8.27 3.49 100.0 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA skin of body (Tissue)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_1_32_+ 1–32 7517.00 46.30 19.54 100.0 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA skin of body (Tissue)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_33_71_+ 33–71 3.00 0.02 0.01 50.0 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA skin of body (Tissue)
TRNA-TRANSCRIPT-CHR16-70789507 tRNA-transcript-chr16-70789507_1_48_+ 1–48 224.00 0.00 0.58 100.0 TRNA-TRANSCRIPT-CHR16-70789507 Gly tRNA skin of body (Tissue)
TRNA-TRANSCRIPT-CHR17-19860862 tRNA-transcript-chr17-19860862_1_32_+ 1–32 12787.00 52.43 33.25 100.0 TRNA-TRANSCRIPT-CHR17-19860862 Gly tRNA skin of body (Tissue)
TRNA-TRANSCRIPT-CHR17-39154491 tRNA-transcript-chr17-39154491_1_34_+ 1–34 5076.00 28.07 13.20 33.78 TRNA-TRANSCRIPT-CHR17-39154491 Cys tRNA skin of body (Tissue)
TRNA-TRANSCRIPT-CHR17-39154491 tRNA-transcript-chr17-39154491_1_13_+ 1–13 99.00 0.55 0.26 100.0 TRNA-TRANSCRIPT-CHR17-39154491 Cys tRNA skin of body (Tissue)
TRNA-TRANSCRIPT-CHR17-39154491 tRNA-transcript-chr17-39154491_1_32_+ 1–32 9952.00 55.04 25.88 66.22 TRNA-TRANSCRIPT-CHR17-39154491 Cys tRNA skin of body (Tissue)
TRNA-TRANSCRIPT-CHR17-49192528 tRNA-transcript-chr17-49192528_1_53_+ 1–53 364.00 13.11 0.95 100.0 TRNA-TRANSCRIPT-CHR17-49192528 Gln tRNA skin of body (Tissue)
TRNA-TRANSCRIPT-CHR17-49192528 tRNA-transcript-chr17-49192528_32_53_+ 32–53 3.00 0.11 0.01 100.0 TRNA-TRANSCRIPT-CHR17-49192528 Gln tRNA skin of body (Tissue)
TRNA-TRANSCRIPT-CHR17-68019897 tRNA-transcript-chr17-68019897_1_33_+ 1–33 2995.00 70.21 7.79 100.0 TRNA-TRANSCRIPT-CHR17-68019897 Arg tRNA skin of body (Tissue)
TRNA-TRANSCRIPT-CHR17-75033906 tRNA-transcript-chr17-75033906_12_29_+ 12–29 1104.00 70.50 2.87 100.0 TRNA-TRANSCRIPT-CHR17-75033906 Arg tRNA skin of body (Tissue)
TRNA-TRANSCRIPT-CHR17-75035113 tRNA-transcript-chr17-75035113_1_33_+ 1–33 417.00 35.67 1.08 100.0 TRNA-TRANSCRIPT-CHR17-75035113 Arg tRNA skin of body (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_8_53_+ 8–53 65.00 1.12 0.17 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA skin of body (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_21_72_+ 21–72 8.00 0.14 0.02 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA skin of body (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_17_54_+ 17–54 70.00 1.21 0.18 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA skin of body (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_1_34_+ 1–34 208.00 3.60 0.54 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA skin of body (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_1_49_+ 1–49 31.00 0.54 0.08 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA skin of body (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_34_53_+ 34–53 38.00 0.66 0.10 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA skin of body (Tissue)