ENCFF001RMJ

Library Details

Organism: Homo Sapiens
Biosample: skin of body (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGA
Description: Part of ENCODE experiment ENCSR000AGA. The libraries contained in this experiment come from human fetal skin tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000849527.1 ENST00000849527.1_293_307_+ 293–307 16.00 7.27 0.04 100.0 ENST00000849527 lncRNA skin of body (Tissue)
TRNA-TRANSCRIPT-CHR1-121016845 tRNA-transcript-chr1-121016845_3_32_+ 3–32 132988.00 21.49 345.78 23.24 TRNA-TRANSCRIPT-CHR1-121016845 Gly tRNA skin of body (Tissue)
TRNA-TRANSCRIPT-CHR1-121016845 tRNA-transcript-chr1-121016845_2_52_+ 2–52 22.00 0.00 0.06 100.0 TRNA-TRANSCRIPT-CHR1-121016845 Gly tRNA skin of body (Tissue)
TRNA-TRANSCRIPT-CHR1-121020729 tRNA-transcript-chr1-121020729_1_54_+ 1–54 1817.00 0.05 4.72 100.0 TRNA-TRANSCRIPT-CHR1-121020729 Val tRNA skin of body (Tissue)
TRNA-TRANSCRIPT-CHR1-145157157 tRNA-transcript-chr1-145157157_1_33_+ 1–33 3781.00 32.17 9.83 100.0 TRNA-TRANSCRIPT-CHR1-145157157 Val tRNA skin of body (Tissue)
TRNA-TRANSCRIPT-CHR1-145157157 tRNA-transcript-chr1-145157157_1_23_+ 1–23 4945.00 42.07 12.86 100.0 TRNA-TRANSCRIPT-CHR1-145157157 Val tRNA skin of body (Tissue)
TRNA-TRANSCRIPT-CHR1-146037061 tRNA-transcript-chr1-146037061_1_53_+ 1–53 145.00 2.91 0.38 100.0 TRNA-TRANSCRIPT-CHR1-146037061 Gly tRNA skin of body (Tissue)
TRNA-TRANSCRIPT-CHR1-148032790 tRNA-transcript-chr1-148032790_1_53_+ 1–53 18.00 1.56 0.05 100.0 TRNA-TRANSCRIPT-CHR1-148032790 Gln tRNA skin of body (Tissue)
TRNA-TRANSCRIPT-CHR1-149692805 tRNA-transcript-chr1-149692805_4_33_+ 4–33 4284.00 50.16 11.14 75.12 TRNA-TRANSCRIPT-CHR1-149692805 Pseudo tRNA skin of body (Tissue)
TRNA-TRANSCRIPT-CHR1-149712552 tRNA-transcript-chr1-149712552_1_39_+ 1–39 141.00 0.00 0.37 100.0 TRNA-TRANSCRIPT-CHR1-149712552 Val tRNA skin of body (Tissue)
TRNA-TRANSCRIPT-CHR1-159141611 tRNA-transcript-chr1-159141611_3_20_+ 3–20 874.00 64.60 2.27 100.0 TRNA-TRANSCRIPT-CHR1-159141611 Arg tRNA skin of body (Tissue)
TRNA-TRANSCRIPT-CHR1-161440825 tRNA-transcript-chr1-161440825_4_34_+ 4–34 15068.00 28.38 39.18 90.66 TRNA-TRANSCRIPT-CHR1-161440825 Asp tRNA skin of body (Tissue)
TRNA-TRANSCRIPT-CHR1-161440825 tRNA-transcript-chr1-161440825_32_53_+ 32–53 29.00 0.05 0.08 100.0 TRNA-TRANSCRIPT-CHR1-161440825 Asp tRNA skin of body (Tissue)
TRNA-TRANSCRIPT-CHR1-161440825 tRNA-transcript-chr1-161440825_40_71_+ 40–71 122.00 0.23 0.32 100.0 TRNA-TRANSCRIPT-CHR1-161440825 Asp tRNA skin of body (Tissue)
TRNA-TRANSCRIPT-CHR1-161448951 tRNA-transcript-chr1-161448951_1_26_+ 1–26 3385.00 28.74 8.80 100.0 TRNA-TRANSCRIPT-CHR1-161448951 Leu tRNA skin of body (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_1_53_+ 1–53 1378.00 0.18 3.58 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA skin of body (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_14_49_+ 14–49 1340.00 0.18 3.48 86.01 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA skin of body (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_21_34_+ 21–34 142.00 0.02 0.37 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA skin of body (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_16_42_+ 16–42 430.00 0.06 1.12 79.63 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA skin of body (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_4_33_+ 4–33 114455.00 15.27 297.59 45.03 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA skin of body (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_1_72_+ 1–72 1099.00 0.15 2.86 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA skin of body (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_21_49_+ 21–49 14.00 0.00 0.04 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA skin of body (Tissue)
TRNA-TRANSCRIPT-CHR1-161480566 tRNA-transcript-chr1-161480566_1_32_+ 1–32 2858.00 66.53 7.43 100.0 TRNA-TRANSCRIPT-CHR1-161480566 Gly tRNA skin of body (Tissue)
TRNA-TRANSCRIPT-CHR1-16545939 tRNA-transcript-chr1-16545939_1_52_+ 1–52 233.00 0.00 0.61 100.0 TRNA-TRANSCRIPT-CHR1-16545939 Gly tRNA skin of body (Tissue)
TRNA-TRANSCRIPT-CHR1-16678271 tRNA-transcript-chr1-16678271_1_32_+ 1–32 19287.00 44.55 50.15 100.0 TRNA-TRANSCRIPT-CHR1-16678271 Gly tRNA skin of body (Tissue)