ENCFF001RMJ

Library Details

Organism: Homo Sapiens
Biosample: skin of body (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGA
Description: Part of ENCODE experiment ENCSR000AGA. The libraries contained in this experiment come from human fetal skin tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000685227.3 ENST00000685227.3_1036_1055_+ 1036–1055 353.00 86.31 0.92 100.0 MIR124-1HG-216 lncRNA skin of body (Tissue)
ENST00000685307.3 ENST00000685307.3_1198_1226_+ 1198–1226 209.00 13.69 0.54 100.0 SNHG10-212 lncRNA skin of body (Tissue)
ENST00000686899.3 ENST00000686899.3_568_649_+ 568–649 35592.20 47.72 92.54 50.6 SNHG19-202 lncRNA skin of body (Tissue)
ENST00000686899.3 ENST00000686899.3_568_647_+ 568–647 35028.68 46.96 91.08 61.64 SNHG19-202 lncRNA skin of body (Tissue)
ENST00000686899.3 ENST00000686899.3_562_648_+ 562–648 14.92 0.02 0.04 82.88 SNHG19-202 lncRNA skin of body (Tissue)
ENST00000686899.3 ENST00000686899.3_562_650_+ 562–650 2.16 0.00 0.01 72.05 SNHG19-202 lncRNA skin of body (Tissue)
ENST00000688264.3 ENST00000688264.3_548_571_+ 548–571 4621.00 19.63 12.02 100.0 MIR222HG-206 lncRNA skin of body (Tissue)
ENST00000688264.3 ENST00000688264.3_1402_1424_+ 1402–1424 13218.00 56.16 34.37 82.68 MIR222HG-206 lncRNA skin of body (Tissue)
ENST00000688264.3 ENST00000688264.3_1362_1387_+ 1362–1387 103.00 0.44 0.27 100.0 MIR222HG-206 lncRNA skin of body (Tissue)
ENST00000688371.3 ENST00000688371.3_190_212_+ 190–212 0.95 15.75 0.00 94.5 MIR302CHG-205 lncRNA skin of body (Tissue)
ENST00000688371.3 ENST00000688371.3_673_694_+ 673–694 2.00 33.33 0.01 100.0 MIR302CHG-205 lncRNA skin of body (Tissue)
ENST00000688371.3 ENST00000688371.3_458_478_+ 458–478 2.00 33.33 0.01 100.0 MIR302CHG-205 lncRNA skin of body (Tissue)
ENST00000697734.1 ENST00000697734.1_1838_1871_+ 1838–1871 87.00 21.75 0.23 100.0 RPSA-216 retained intron skin of body (Tissue)
ENST00000697879.1 ENST00000697879.1_547_564_+ 547–564 1886.00 1.64 4.90 78.71 MIR99AHG-370 lncRNA skin of body (Tissue)
ENST00000697879.1 ENST00000697879.1_547_568_+ 547–568 108749.00 94.80 282.76 98.86 MIR99AHG-370 lncRNA skin of body (Tissue)
ENST00000699245.1 ENST00000699245.1_739_776_+ 739–776 130.00 77.84 0.34 100.0 HPS4-237 retained intron skin of body (Tissue)
ENST00000699458.1 ENST00000699458.1_1475_1492_+ 1475–1492 4123.00 89.94 10.72 100.0 MEG8-253 lncRNA skin of body (Tissue)
ENST00000699460.1 ENST00000699460.1_1623_1644_+ 1623–1644 983.00 12.26 2.56 100.0 MEG9-206 lncRNA skin of body (Tissue)
ENST00000699460.1 ENST00000699460.1_1872_1893_+ 1872–1893 1789.00 22.32 4.65 100.0 MEG9-206 lncRNA skin of body (Tissue)
ENST00000699460.1 ENST00000699460.1_2148_2169_+ 2148–2169 1793.00 22.37 4.66 100.0 MEG9-206 lncRNA skin of body (Tissue)
ENST00000703637.1 ENST00000703637.1_459_481_+ 459–481 348.00 12.99 0.90 100.0 DNAJC5-203 nonsense mediated decay skin of body (Tissue)
ENST00000707189.1 ENST00000707189.1_1316_1333_+ 1316–1333 1466.00 25.42 3.81 100.0 ENST00000707189 TEC skin of body (Tissue)
ENST00000710424.1 ENST00000710424.1_1932_2007_+ 1932–2007 73.00 0.03 0.19 100.0 MIR17HG-214 lncRNA skin of body (Tissue)
ENST00000710424.1 ENST00000710424.1_2162_2183_+ 2162–2183 140340.22 58.56 364.90 65.7 MIR17HG-214 lncRNA skin of body (Tissue)
ENST00000710424.1 ENST00000710424.1_1557_1579_+ 1557–1579 71.00 0.03 0.18 100.0 MIR17HG-214 lncRNA skin of body (Tissue)