ENCFF001RMJ

Library Details

Organism: Homo Sapiens
Biosample: skin of body (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGA
Description: Part of ENCODE experiment ENCSR000AGA. The libraries contained in this experiment come from human fetal skin tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000710424.1 ENST00000710424.1_1740_1762_+ 1740–1762 840.00 0.35 2.18 100.0 MIR17HG-214 lncRNA skin of body (Tissue)
ENST00000710424.1 ENST00000710424.1_2162_2185_+ 2162–2185 90939.55 37.95 236.45 42.63 MIR17HG-214 lncRNA skin of body (Tissue)
ENST00000710424.1 ENST00000710424.1_2046_2067_+ 2046–2067 10105.00 4.22 26.27 100.0 MIR17HG-214 lncRNA skin of body (Tissue)
ENST00000710424.1 ENST00000710424.1_2069_2124_+ 2069–2124 108.00 0.05 0.28 100.0 MIR17HG-214 lncRNA skin of body (Tissue)
ENST00000710424.1 ENST00000710424.1_1873_1895_+ 1873–1895 3377.00 1.41 8.78 100.0 MIR17HG-214 lncRNA skin of body (Tissue)
ENST00000710424.1 ENST00000710424.1_1419_1441_+ 1419–1441 2317.00 0.97 6.02 100.0 MIR17HG-214 lncRNA skin of body (Tissue)
ENST00000718227.1 ENST00000718227.1_356_384_+ 356–384 1982.00 0.62 5.15 100.0 SNHG32-223 lncRNA skin of body (Tissue)
ENST00000718227.1 ENST00000718227.1_387_419_+ 387–419 1358.00 0.43 3.53 100.0 SNHG32-223 lncRNA skin of body (Tissue)
ENST00000718227.1 ENST00000718227.1_359_419_+ 359–419 483.00 0.15 1.26 100.0 SNHG32-223 lncRNA skin of body (Tissue)
ENST00000718227.1 ENST00000718227.1_352_421_+ 352–421 2607.00 0.82 6.78 60.59 SNHG32-223 lncRNA skin of body (Tissue)
ENST00000718227.1 ENST00000718227.1_356_419_+ 356–419 303886.00 95.75 790.13 100.0 SNHG32-223 lncRNA skin of body (Tissue)
ENST00000718231.1 ENST00000718231.1_1950_2016_+ 1950–2016 42864.00 79.90 111.45 97.42 SNHG32-227 lncRNA skin of body (Tissue)
ENST00000718231.1 ENST00000718231.1_1988_2016_+ 1988–2016 1000.00 1.86 2.60 100.0 SNHG32-227 lncRNA skin of body (Tissue)
ENST00000718231.1 ENST00000718231.1_1955_2016_+ 1955–2016 1268.00 2.36 3.30 100.0 SNHG32-227 lncRNA skin of body (Tissue)
ENST00000718231.1 ENST00000718231.1_1964_2016_+ 1964–2016 1904.00 3.55 4.95 100.0 SNHG32-227 lncRNA skin of body (Tissue)
ENST00000718311.1 ENST00000718311.1_841_855_+ 841–855 427.00 74.52 1.11 100.0 B4GALT1-203 nonsense mediated decay skin of body (Tissue)
ENST00000722183.1 ENST00000722183.1_57_79_+ 57–79 771.00 0.75 2.00 100.0 ENST00000722183 lncRNA skin of body (Tissue)
ENST00000722183.1 ENST00000722183.1_143_158_+ 143–158 39320.00 38.25 102.24 70.38 ENST00000722183 lncRNA skin of body (Tissue)
ENST00000722183.1 ENST00000722183.1_126_158_+ 126–158 20852.00 20.29 54.22 100.0 ENST00000722183 lncRNA skin of body (Tissue)
ENST00000726427.1 ENST00000726427.1_819_841_+ 819–841 177.00 81.19 0.46 100.0 MIR34BHG-202 lncRNA skin of body (Tissue)
ENST00000730292.1 ENST00000730292.1_241_262_+ 241–262 1924.00 76.65 5.00 86.12 THBS3-AS1-228 lncRNA skin of body (Tissue)
ENST00000732834.1 ENST00000732834.1_2132_2152_+ 2132–2152 4523.00 50.72 11.76 100.0 MIR200CHG-202 lncRNA skin of body (Tissue)
ENST00000732834.1 ENST00000732834.1_1719_1741_+ 1719–1741 2011.00 22.55 5.23 100.0 MIR200CHG-202 lncRNA skin of body (Tissue)
ENST00000738116.1 ENST00000738116.1_64_138_+ 64–138 235.00 2.80 0.61 100.0 SNHG16-266 lncRNA skin of body (Tissue)
ENST00000738116.1 ENST00000738116.1_111_138_+ 111–138 2081.00 24.79 5.41 100.0 SNHG16-266 lncRNA skin of body (Tissue)