ENCFF001RMJ

Library Details

Organism: Homo Sapiens
Biosample: skin of body (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGA
Description: Part of ENCODE experiment ENCSR000AGA. The libraries contained in this experiment come from human fetal skin tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000668505.1 ENST00000668505.1_988_1033_+ 988–1033 413.00 0.34 1.07 100.0 SNHG5-273 lncRNA skin of body (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1353_+ 1278–1353 53121.73 43.41 138.12 60.19 SNHG5-273 lncRNA skin of body (Tissue)
ENST00000668505.1 ENST00000668505.1_988_1056_+ 988–1056 17876.00 14.61 46.48 88.64 SNHG5-273 lncRNA skin of body (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1315_+ 1278–1315 34.00 0.03 0.09 100.0 SNHG5-273 lncRNA skin of body (Tissue)
ENST00000668505.1 ENST00000668505.1_1279_1308_+ 1279–1308 924.00 0.76 2.40 100.0 SNHG5-273 lncRNA skin of body (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1340_+ 1278–1340 16.00 0.01 0.04 100.0 SNHG5-273 lncRNA skin of body (Tissue)
ENST00000668505.1 ENST00000668505.1_1272_1352_+ 1272–1352 1.00 0.00 0.00 100.0 SNHG5-273 lncRNA skin of body (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1361_+ 1278–1361 1650.00 1.35 4.29 98.21 SNHG5-273 lncRNA skin of body (Tissue)
ENST00000669673.1 ENST00000669673.1_3794_3884_+ 3794–3884 420.00 9.54 1.09 71.79 SNHG14-323 lncRNA skin of body (Tissue)
ENST00000670680.1 ENST00000670680.1_34_69_+ 34–69 5753.00 0.35 14.96 64.17 MEG8-251 lncRNA skin of body (Tissue)
ENST00000670680.1 ENST00000670680.1_2_69_+ 2–69 1561682.00 95.45 4060.53 99.27 MEG8-251 lncRNA skin of body (Tissue)
ENST00000670680.1 ENST00000670680.1_36_69_+ 36–69 4449.00 0.27 11.57 51.33 MEG8-251 lncRNA skin of body (Tissue)
ENST00000670680.1 ENST00000670680.1_1539_1602_+ 1539–1602 21770.00 1.33 56.60 93.44 MEG8-251 lncRNA skin of body (Tissue)
ENST00000670680.1 ENST00000670680.1_10_70_+ 10–70 4926.00 0.30 12.81 100.0 MEG8-251 lncRNA skin of body (Tissue)
ENST00000670697.1 ENST00000670697.1_233_310_+ 233–310 7595.00 57.47 19.75 85.92 SNHG14-336 lncRNA skin of body (Tissue)
ENST00000670697.1 ENST00000670697.1_232_313_+ 232–313 5015.00 37.95 13.04 61.62 SNHG14-336 lncRNA skin of body (Tissue)
ENST00000671491.1 ENST00000671491.1_1778_1868_+ 1778–1868 1807.00 55.28 4.70 91.59 SNHG14-341 lncRNA skin of body (Tissue)
ENST00000676514.1 ENST00000676514.1_1978_2054_+ 1978–2054 423.00 15.26 1.10 100.0 NCL-211 retained intron skin of body (Tissue)
ENST00000679646.1 ENST00000679646.1_899_921_+ 899–921 3.00 7.69 0.01 100.0 FMN2-209 protein coding CDS not defined skin of body (Tissue)
ENST00000685142.3 ENST00000685142.3_1449_1480_+ 1449–1480 18.00 0.15 0.05 100.0 LINC02739-203 lncRNA skin of body (Tissue)
ENST00000685142.3 ENST00000685142.3_1409_1423_+ 1409–1423 36.00 0.31 0.09 22.93 LINC02739-203 lncRNA skin of body (Tissue)
ENST00000685142.3 ENST00000685142.3_1421_1436_+ 1421–1436 1508.00 12.93 3.92 100.0 LINC02739-203 lncRNA skin of body (Tissue)
ENST00000685142.3 ENST00000685142.3_1409_1440_+ 1409–1440 3894.00 33.40 10.12 100.0 LINC02739-203 lncRNA skin of body (Tissue)
ENST00000685142.3 ENST00000685142.3_1405_1444_+ 1405–1444 112.00 0.96 0.29 100.0 LINC02739-203 lncRNA skin of body (Tissue)
ENST00000685142.3 ENST00000685142.3_1409_1421_+ 1409–1421 121.00 1.04 0.31 77.07 LINC02739-203 lncRNA skin of body (Tissue)