ENCFF001RMJ

Library Details

Organism: Homo Sapiens
Biosample: skin of body (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGA
Description: Part of ENCODE experiment ENCSR000AGA. The libraries contained in this experiment come from human fetal skin tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000649692.2 ENST00000649692.2_1755_1822_+ 1755–1822 1246.00 15.86 3.24 38.19 HSPA9-211 retained intron skin of body (Tissue)
ENST00000650189.1 ENST00000650189.1_167_187_+ 167–187 247124.00 90.04 642.55 100.0 DNM3OS-205 lncRNA skin of body (Tissue)
ENST00000650796.1 ENST00000650796.1_2858_2910_+ 2858–2910 24.00 0.00 0.06 100.0 GAS5-230 retained intron skin of body (Tissue)
ENST00000650796.1 ENST00000650796.1_709_770_+ 709–770 3608.00 0.34 9.38 100.0 GAS5-230 retained intron skin of body (Tissue)
ENST00000650796.1 ENST00000650796.1_1648_1723_+ 1648–1723 3547.00 0.34 9.22 73.73 GAS5-230 retained intron skin of body (Tissue)
ENST00000650796.1 ENST00000650796.1_137_198_+ 137–198 12262.00 1.16 31.88 92.84 GAS5-230 retained intron skin of body (Tissue)
ENST00000650796.1 ENST00000650796.1_1391_1418_+ 1391–1418 23.00 0.00 0.06 100.0 GAS5-230 retained intron skin of body (Tissue)
ENST00000650796.1 ENST00000650796.1_2631_2663_+ 2631–2663 348.00 0.03 0.90 100.0 GAS5-230 retained intron skin of body (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1103_+ 1048–1103 348.00 0.03 0.90 100.0 GAS5-230 retained intron skin of body (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1108_+ 1048–1108 770570.00 73.08 2003.56 99.81 GAS5-230 retained intron skin of body (Tissue)
ENST00000650796.1 ENST00000650796.1_1075_1108_+ 1075–1108 1430.00 0.14 3.72 100.0 GAS5-230 retained intron skin of body (Tissue)
ENST00000650796.1 ENST00000650796.1_1424_1452_+ 1424–1452 7949.00 0.75 20.67 100.0 GAS5-230 retained intron skin of body (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1075_+ 1048–1075 967.00 0.09 2.51 100.0 GAS5-230 retained intron skin of body (Tissue)
ENST00000650796.1 ENST00000650796.1_2631_2673_+ 2631–2673 335.00 0.03 0.87 100.0 GAS5-230 retained intron skin of body (Tissue)
ENST00000650796.1 ENST00000650796.1_1049_1079_+ 1049–1079 1454.00 0.14 3.78 100.0 GAS5-230 retained intron skin of body (Tissue)
ENST00000650796.1 ENST00000650796.1_157_198_+ 157–198 753.00 0.07 1.96 100.0 GAS5-230 retained intron skin of body (Tissue)
ENST00000650796.1 ENST00000650796.1_160_197_+ 160–197 500.00 0.05 1.30 100.0 GAS5-230 retained intron skin of body (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1086_+ 1048–1086 564.00 0.05 1.47 100.0 GAS5-230 retained intron skin of body (Tissue)
ENST00000650796.1 ENST00000650796.1_2890_2925_+ 2890–2925 8989.00 0.85 23.37 85.81 GAS5-230 retained intron skin of body (Tissue)
ENST00000650796.1 ENST00000650796.1_2898_2925_+ 2898–2925 9544.00 0.91 24.82 100.0 GAS5-230 retained intron skin of body (Tissue)
ENST00000650796.1 ENST00000650796.1_363_440_+ 363–440 27450.00 2.60 71.37 100.0 GAS5-230 retained intron skin of body (Tissue)
ENST00000650796.1 ENST00000650796.1_2631_2707_+ 2631–2707 41523.00 3.94 107.96 96.37 GAS5-230 retained intron skin of body (Tissue)
ENST00000650796.1 ENST00000650796.1_2172_2243_+ 2172–2243 98369.00 9.33 255.77 100.0 GAS5-230 retained intron skin of body (Tissue)
ENST00000650796.1 ENST00000650796.1_400_440_+ 400–440 860.00 0.08 2.24 100.0 GAS5-230 retained intron skin of body (Tissue)
ENST00000650796.1 ENST00000650796.1_1391_1452_+ 1391–1452 8978.00 0.85 23.34 100.0 GAS5-230 retained intron skin of body (Tissue)