ENCFF001RMJ

Library Details

Organism: Homo Sapiens
Biosample: skin of body (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGA
Description: Part of ENCODE experiment ENCSR000AGA. The libraries contained in this experiment come from human fetal skin tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000619323.3 ENST00000619323.3_499_520_+ 499–520 204941.00 97.26 532.87 98.79 ENST00000619323 lncRNA skin of body (Tissue)
ENST00000625402.1 ENST00000625402.1_2_49_+ 2–49 88.00 7.52 0.23 100.0 SCARNA4-202 scaRNA skin of body (Tissue)
ENST00000625572.1 ENST00000625572.1_23_92_+ 23–92 547.00 74.83 1.42 100.0 ENST00000625572 miRNA skin of body (Tissue)
ENST00000628177.1 ENST00000628177.1_1_79_+ 1–79 19487.00 91.65 50.67 100.0 ENST00000628177 snoRNA skin of body (Tissue)
ENST00000630615.1 ENST00000630615.1_10_70_+ 10–70 2586.00 88.90 6.72 100.0 ENST00000630615 snoRNA skin of body (Tissue)
ENST00000635183.1 ENST00000635183.1_1617_1632_+ 1617–1632 96.00 15.21 0.25 100.0 DMRT2-209 protein coding skin of body (Tissue)
ENST00000635183.1 ENST00000635183.1_323_334_+ 323–334 30.00 4.75 0.08 100.0 DMRT2-209 protein coding skin of body (Tissue)
ENST00000636377.1 ENST00000636377.1_38_65_+ 38–65 704.00 13.17 1.83 100.0 SNORD98-201 snoRNA skin of body (Tissue)
ENST00000636377.1 ENST00000636377.1_2_65_+ 2–65 3088.00 57.75 8.03 100.0 SNORD98-201 snoRNA skin of body (Tissue)
ENST00000636668.1 ENST00000636668.1_3209_3232_+ 3209–3232 73245.00 34.74 190.44 38.38 MIR106AHG-201 lncRNA skin of body (Tissue)
ENST00000636668.1 ENST00000636668.1_3371_3393_+ 3371–3393 228.49 0.11 0.59 19.06 MIR106AHG-201 lncRNA skin of body (Tissue)
ENST00000636668.1 ENST00000636668.1_2902_2924_+ 2902–2924 285.00 0.14 0.74 100.0 MIR106AHG-201 lncRNA skin of body (Tissue)
ENST00000636668.1 ENST00000636668.1_3371_3391_+ 3371–3391 921.01 0.44 2.39 76.81 MIR106AHG-201 lncRNA skin of body (Tissue)
ENST00000638012.2 ENST00000638012.2_1_28_+ 1–28 1451.00 7.94 3.77 100.0 MEG8-222 lncRNA skin of body (Tissue)
ENST00000638012.2 ENST00000638012.2_1_70_+ 1–70 8509.00 46.56 22.12 100.0 MEG8-222 lncRNA skin of body (Tissue)
ENST00000640631.2 ENST00000640631.2_7388_7482_+ 7388–7482 4515.00 12.49 11.74 94.44 SNHG14-224 lncRNA skin of body (Tissue)
ENST00000640631.2 ENST00000640631.2_4125_4215_+ 4125–4215 16850.00 46.62 43.81 89.05 SNHG14-224 lncRNA skin of body (Tissue)
ENST00000640631.2 ENST00000640631.2_9465_9551_+ 9465–9551 2868.00 7.94 7.46 100.0 SNHG14-224 lncRNA skin of body (Tissue)
ENST00000640631.2 ENST00000640631.2_5267_5357_+ 5267–5357 86.00 0.24 0.22 94.51 SNHG14-224 lncRNA skin of body (Tissue)
ENST00000640631.2 ENST00000640631.2_4125_4168_+ 4125–4168 61.00 0.17 0.16 100.0 SNHG14-224 lncRNA skin of body (Tissue)
ENST00000640631.2 ENST00000640631.2_7389_7479_+ 7389–7479 1642.00 4.54 4.27 49.47 SNHG14-224 lncRNA skin of body (Tissue)
ENST00000640631.2 ENST00000640631.2_288_349_+ 288–349 1413.00 3.91 3.67 76.05 SNHG14-224 lncRNA skin of body (Tissue)
ENST00000640631.2 ENST00000640631.2_287_352_+ 287–352 951.00 2.63 2.47 58.06 SNHG14-224 lncRNA skin of body (Tissue)
ENST00000648813.1 ENST00000648813.1_104_120_+ 104–120 779.70 25.73 2.03 73.07 5S_rRNA.20-201 rRNA pseudogene skin of body (Tissue)
ENST00000649692.2 ENST00000649692.2_3826_3892_+ 3826–3892 213.00 2.71 0.55 100.0 HSPA9-211 retained intron skin of body (Tissue)