ENCFF001RMJ

Library Details

Organism: Homo Sapiens
Biosample: skin of body (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGA
Description: Part of ENCODE experiment ENCSR000AGA. The libraries contained in this experiment come from human fetal skin tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000577164.2 ENST00000577164.2_444_465_+ 444–465 355822.00 99.61 925.17 99.87 MIR22HG-212 lncRNA skin of body (Tissue)
ENST00000577887.1 ENST00000577887.1_1_51_+ 1–51 125.00 0.24 0.33 35.71 SNORD53B-201 snoRNA skin of body (Tissue)
ENST00000577887.1 ENST00000577887.1_1_76_+ 1–76 46856.00 90.69 121.83 93.89 SNORD53B-201 snoRNA skin of body (Tissue)
ENST00000577887.1 ENST00000577887.1_1_53_+ 1–53 225.00 0.44 0.59 64.29 SNORD53B-201 snoRNA skin of body (Tissue)
ENST00000578036.5 ENST00000578036.5_3605_3616_+ 3605–3616 1413.00 90.52 3.67 100.0 ENST00000578036 lncRNA skin of body (Tissue)
ENST00000578181.1 ENST00000578181.1_477_541_+ 477–541 4463.00 84.48 11.60 100.0 RPL23A-207 protein coding skin of body (Tissue)
ENST00000578242.1 ENST00000578242.1_11_31_+ 11–31 504.00 72.52 1.31 100.0 MIR744-201 miRNA skin of body (Tissue)
ENST00000578683.1 ENST00000578683.1_11_30_+ 11–30 1813.00 72.43 4.71 100.0 MIR378C-201 miRNA skin of body (Tissue)
ENST00000579003.2 ENST00000579003.2_1219_1238_+ 1219–1238 8007.00 68.96 20.82 78.33 MIR142HG-201 lncRNA skin of body (Tissue)
ENST00000579003.2 ENST00000579003.2_1257_1279_+ 1257–1279 49.00 0.42 0.13 100.0 MIR142HG-201 lncRNA skin of body (Tissue)
ENST00000579003.2 ENST00000579003.2_1221_1241_+ 1221–1241 481.00 4.14 1.25 13.17 MIR142HG-201 lncRNA skin of body (Tissue)
ENST00000580533.1 ENST00000580533.1_1_91_+ 1–91 321.00 1.86 0.83 100.0 SNORD3C-201 snoRNA skin of body (Tissue)
ENST00000580755.1 ENST00000580755.1_131_197_+ 131–197 394.90 0.23 1.03 61.9 RPL23A-208 retained intron skin of body (Tissue)
ENST00000580755.1 ENST00000580755.1_131_199_+ 131–199 242.02 0.14 0.63 50.53 RPL23A-208 retained intron skin of body (Tissue)
ENST00000580755.1 ENST00000580755.1_132_190_+ 132–190 129722.00 73.94 337.29 88.24 RPL23A-208 retained intron skin of body (Tissue)
ENST00000580755.1 ENST00000580755.1_131_193_+ 131–193 38332.00 21.85 99.67 90.86 RPL23A-208 retained intron skin of body (Tissue)
ENST00000581072.6 ENST00000581072.6_810_831_+ 810–831 2559.00 1.75 6.65 100.0 MIR133A1HG-202 lncRNA skin of body (Tissue)
ENST00000581305.1 ENST00000581305.1_509_570_+ 509–570 2645.00 2.05 6.88 33.18 RPL17-211 retained intron skin of body (Tissue)
ENST00000581305.1 ENST00000581305.1_127_189_+ 127–189 13570.00 10.52 35.28 41.94 RPL17-211 retained intron skin of body (Tissue)
ENST00000581305.1 ENST00000581305.1_127_196_+ 127–196 109.00 0.08 0.28 100.0 RPL17-211 retained intron skin of body (Tissue)
ENST00000581305.1 ENST00000581305.1_127_192_+ 127–192 78516.00 60.85 204.15 95.13 RPL17-211 retained intron skin of body (Tissue)
ENST00000581305.1 ENST00000581305.1_509_573_+ 509–573 27721.00 21.48 72.08 97.28 RPL17-211 retained intron skin of body (Tissue)
ENST00000582320.4 ENST00000582320.4_575_597_+ 575–597 75625.00 61.61 196.63 78.33 ENST00000582320 lncRNA skin of body (Tissue)
ENST00000582320.4 ENST00000582320.4_395_417_+ 395–417 11067.00 9.02 28.78 100.0 ENST00000582320 lncRNA skin of body (Tissue)
ENST00000582320.4 ENST00000582320.4_575_600_+ 575–600 10884.00 8.87 28.30 100.0 ENST00000582320 lncRNA skin of body (Tissue)