ENCFF001RMJ

Library Details

Organism: Homo Sapiens
Biosample: skin of body (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGA
Description: Part of ENCODE experiment ENCSR000AGA. The libraries contained in this experiment come from human fetal skin tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000557108.6 ENST00000557108.6_4526_4587_+ 4526–4587 26035.00 51.04 67.69 100.0 SNHG14-220 retained intron skin of body (Tissue)
ENST00000557108.6 ENST00000557108.6_4551_4587_+ 4551–4587 382.00 0.75 0.99 100.0 SNHG14-220 retained intron skin of body (Tissue)
ENST00000557108.6 ENST00000557108.6_1419_1490_+ 1419–1490 22192.00 43.51 57.70 100.0 SNHG14-220 retained intron skin of body (Tissue)
ENST00000559466.1 ENST00000559466.1_665_676_+ 665–676 2607.00 99.43 6.78 100.0 TEKT4P2-201 transcribed unprocessed pseudogene skin of body (Tissue)
ENST00000561554.5 ENST00000561554.5_276_344_+ 276–344 134669.00 92.23 350.15 98.7 RPL4-202 retained intron skin of body (Tissue)
ENST00000561554.5 ENST00000561554.5_316_344_+ 316–344 422.00 0.29 1.10 100.0 RPL4-202 retained intron skin of body (Tissue)
ENST00000561554.5 ENST00000561554.5_276_317_+ 276–317 214.00 0.15 0.56 100.0 RPL4-202 retained intron skin of body (Tissue)
ENST00000561554.5 ENST00000561554.5_276_321_+ 276–321 19.00 0.01 0.05 100.0 RPL4-202 retained intron skin of body (Tissue)
ENST00000561554.5 ENST00000561554.5_311_344_+ 311–344 1033.00 0.71 2.69 100.0 RPL4-202 retained intron skin of body (Tissue)
ENST00000563103.1 ENST00000563103.1_221_256_+ 221–256 4.00 0.00 0.01 100.0 ENST00000563103 lncRNA skin of body (Tissue)
ENST00000564647.5 ENST00000564647.5_345_386_+ 345–386 89.00 1.00 0.23 100.0 RPL4-207 retained intron skin of body (Tissue)
ENST00000564647.5 ENST00000564647.5_318_386_+ 318–386 4688.00 52.87 12.19 100.0 RPL4-207 retained intron skin of body (Tissue)
ENST00000565336.1 ENST00000565336.1_446_487_+ 446–487 3594.00 2.47 9.34 63.35 ENST00000565336 lncRNA skin of body (Tissue)
ENST00000565336.1 ENST00000565336.1_451_487_+ 451–487 133425.00 91.75 346.92 98.01 ENST00000565336 lncRNA skin of body (Tissue)
ENST00000565907.1 ENST00000565907.1_307_388_+ 307–388 378.00 0.15 0.98 100.0 RBMX-210 retained intron skin of body (Tissue)
ENST00000565907.1 ENST00000565907.1_307_354_+ 307–354 1504.00 0.59 3.91 100.0 RBMX-210 retained intron skin of body (Tissue)
ENST00000565907.1 ENST00000565907.1_307_350_+ 307–350 2883.00 1.13 7.50 100.0 RBMX-210 retained intron skin of body (Tissue)
ENST00000565907.1 ENST00000565907.1_307_381_+ 307–381 203374.00 79.99 528.79 83.98 RBMX-210 retained intron skin of body (Tissue)
ENST00000567229.5 ENST00000567229.5_485_573_+ 485–573 4771.00 56.89 12.41 100.0 RPL4-214 retained intron skin of body (Tissue)
ENST00000567229.5 ENST00000567229.5_1097_1162_+ 1097–1162 446.00 5.32 1.16 100.0 RPL4-214 retained intron skin of body (Tissue)
ENST00000569473.1 ENST00000569473.1_47_96_+ 47–96 411.00 0.36 1.07 100.0 POLG-DT-202 lncRNA skin of body (Tissue)
ENST00000569473.1 ENST00000569473.1_59_96_+ 59–96 18142.61 15.81 47.17 18.93 POLG-DT-202 lncRNA skin of body (Tissue)
ENST00000569473.1 ENST00000569473.1_61_96_+ 61–96 72134.74 62.86 187.56 71.01 POLG-DT-202 lncRNA skin of body (Tissue)
ENST00000570843.1 ENST00000570843.1_7_38_+ 7–38 29102.00 82.73 75.67 100.0 ENST00000570843 lncRNA skin of body (Tissue)
ENST00000572453.1 ENST00000572453.1_1973_1994_+ 1973–1994 10003.00 80.23 26.01 100.0 MIR497HG-207 lncRNA skin of body (Tissue)