ENCFF001RMI

Library Details

Organism: Homo Sapiens
Biosample: skeletal muscle tissue (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFZ
Description: Part of ENCODE experiment ENCSR000AFZ. The libraries contained in this experiment come from human fetal skeletal muscle tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000650796.1 ENST00000650796.1_1048_1118_+ 1048–1118 129.00 0.02 0.56 100.0 GAS5-230 retained intron skeletal muscle tissue (Tissue)
ENST00000651140.1 ENST00000651140.1_696_716_+ 696–716 275.00 9.00 1.19 100.0 FTX-219 lncRNA skeletal muscle tissue (Tissue)
ENST00000651140.1 ENST00000651140.1_890_912_+ 890–912 1705.00 55.77 7.39 78.25 FTX-219 lncRNA skeletal muscle tissue (Tissue)
ENST00000651323.1 ENST00000651323.1_5199_5247_+ 5199–5247 341.00 7.02 1.48 72.4 CTC1-214 protein coding skeletal muscle tissue (Tissue)
ENST00000651323.1 ENST00000651323.1_5233_5247_+ 5233–5247 201.00 4.14 0.87 75.56 CTC1-214 protein coding skeletal muscle tissue (Tissue)
ENST00000651323.1 ENST00000651323.1_5163_5174_+ 5163–5174 738.00 15.20 3.20 69.69 CTC1-214 protein coding skeletal muscle tissue (Tissue)
ENST00000651323.1 ENST00000651323.1_5201_5247_+ 5201–5247 130.00 2.68 0.56 27.6 CTC1-214 protein coding skeletal muscle tissue (Tissue)
ENST00000651323.1 ENST00000651323.1_5163_5177_+ 5163–5177 709.00 14.60 3.07 86.78 CTC1-214 protein coding skeletal muscle tissue (Tissue)
ENST00000651323.1 ENST00000651323.1_5214_5247_+ 5214–5247 78.00 1.61 0.34 100.0 CTC1-214 protein coding skeletal muscle tissue (Tissue)
ENST00000651323.1 ENST00000651323.1_5163_5185_+ 5163–5185 214.00 4.41 0.93 100.0 CTC1-214 protein coding skeletal muscle tissue (Tissue)
ENST00000651323.1 ENST00000651323.1_5230_5247_+ 5230–5247 300.00 6.18 1.30 100.0 CTC1-214 protein coding skeletal muscle tissue (Tissue)
ENST00000651540.1 ENST00000651540.1_6_45_+ 6–45 1833.00 3.34 7.95 74.0 ENST00000651540 lncRNA skeletal muscle tissue (Tissue)
ENST00000651540.1 ENST00000651540.1_57_88_+ 57–88 240.00 0.44 1.04 99.17 ENST00000651540 lncRNA skeletal muscle tissue (Tissue)
ENST00000651540.1 ENST00000651540.1_6_55_+ 6–55 670.00 1.22 2.91 100.0 ENST00000651540 lncRNA skeletal muscle tissue (Tissue)
ENST00000651540.1 ENST00000651540.1_6_33_+ 6–33 4472.00 8.14 19.39 60.03 ENST00000651540 lncRNA skeletal muscle tissue (Tissue)
ENST00000651540.1 ENST00000651540.1_70_88_+ 70–88 346.00 0.63 1.50 100.0 ENST00000651540 lncRNA skeletal muscle tissue (Tissue)
ENST00000651540.1 ENST00000651540.1_6_75_+ 6–75 606.00 1.10 2.63 100.0 ENST00000651540 lncRNA skeletal muscle tissue (Tissue)
ENST00000651540.1 ENST00000651540.1_6_79_+ 6–79 433.00 0.79 1.88 100.0 ENST00000651540 lncRNA skeletal muscle tissue (Tissue)
ENST00000651540.1 ENST00000651540.1_6_28_+ 6–28 1120.00 2.04 4.86 100.0 ENST00000651540 lncRNA skeletal muscle tissue (Tissue)
ENST00000651540.1 ENST00000651540.1_6_88_+ 6–88 484.00 0.88 2.10 100.0 ENST00000651540 lncRNA skeletal muscle tissue (Tissue)
ENST00000651540.1 ENST00000651540.1_6_36_+ 6–36 13652.00 24.85 59.21 55.59 ENST00000651540 lncRNA skeletal muscle tissue (Tissue)
ENST00000651540.1 ENST00000651540.1_6_51_+ 6–51 1392.00 2.53 6.04 100.0 ENST00000651540 lncRNA skeletal muscle tissue (Tissue)
ENST00000651540.1 ENST00000651540.1_6_39_+ 6–39 19481.00 35.46 84.49 80.37 ENST00000651540 lncRNA skeletal muscle tissue (Tissue)
ENST00000652769.2 ENST00000652769.2_3101_3122_+ 3101–3122 21623.00 3.29 93.78 100.0 MIRLET7A1HG-203 lncRNA skeletal muscle tissue (Tissue)
ENST00000653102.1 ENST00000653102.1_9_77_+ 9–77 125946.00 90.47 546.22 100.0 MEG8-225 lncRNA skeletal muscle tissue (Tissue)