ENCFF001RMI

Library Details

Organism: Homo Sapiens
Biosample: skeletal muscle tissue (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFZ
Description: Part of ENCODE experiment ENCSR000AFZ. The libraries contained in this experiment come from human fetal skeletal muscle tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000251287.3 ENST00000251287.3_396_409_+ 396–409 1.00 4.35 0.00 100.0 HCN2-201 protein coding skeletal muscle tissue (Tissue)
ENST00000261038.6 ENST00000261038.6_3100_3122_+ 3100–3122 166.00 82.18 0.72 100.0 SLC49A4-201 protein coding skeletal muscle tissue (Tissue)
ENST00000284727.9 ENST00000284727.9_2255_2286_+ 2255–2286 162.00 8.89 0.70 100.0 ATP5MC3-201 protein coding skeletal muscle tissue (Tissue)
ENST00000302506.8 ENST00000302506.8_1928_1942_+ 1928–1942 323.00 94.44 1.40 100.0 CDC25A-201 protein coding skeletal muscle tissue (Tissue)
ENST00000320776.5 ENST00000320776.5_289_301_+ 289–301 20.00 57.14 0.09 100.0 BLOC1S4-201 protein coding skeletal muscle tissue (Tissue)
ENST00000321990.5 ENST00000321990.5_6301_6324_+ 6301–6324 84.00 5.32 0.36 100.0 ATAD5-201 protein coding skeletal muscle tissue (Tissue)
ENST00000325089.7 ENST00000325089.7_9_20_+ 9–20 562.00 43.13 2.44 100.0 SLITRK5-201 protein coding skeletal muscle tissue (Tissue)
ENST00000325418.5 ENST00000325418.5_207_220_+ 207–220 37.00 40.66 0.16 100.0 HASPIN-201 protein coding skeletal muscle tissue (Tissue)
ENST00000327423.11 ENST00000327423.11_9327_9339_+ 9327–9339 212.00 54.92 0.92 100.0 PRR14L-201 protein coding skeletal muscle tissue (Tissue)
ENST00000336854.9 ENST00000336854.9_1124_1136_+ 1124–1136 816.00 91.38 3.54 100.0 ATG101-201 protein coding skeletal muscle tissue (Tissue)
ENST00000345127.9 ENST00000345127.9_4554_4567_+ 4554–4567 1015.00 73.07 4.40 100.0 PRICKLE1-201 protein coding skeletal muscle tissue (Tissue)
ENST00000347538.2 ENST00000347538.2_59_81_+ 59–81 442694.00 93.39 1919.92 95.28 MIR133A2-201 miRNA skeletal muscle tissue (Tissue)
ENST00000358769.7 ENST00000358769.7_52_66_+ 52–66 19.00 27.14 0.08 100.0 PBLD-204 protein coding skeletal muscle tissue (Tissue)
ENST00000360737.4 ENST00000360737.4_3384_3405_+ 3384–3405 319331.00 89.81 1384.91 99.23 MIRLET7BHG-201 lncRNA skeletal muscle tissue (Tissue)
ENST00000360737.4 ENST00000360737.4_4323_4344_+ 4323–4344 25310.00 7.12 109.77 94.3 MIRLET7BHG-201 lncRNA skeletal muscle tissue (Tissue)
ENST00000362103.4 ENST00000362103.4_40_58_+ 40–58 1.00 0.52 0.00 33.33 MIR375-201 miRNA skeletal muscle tissue (Tissue)
ENST00000362103.4 ENST00000362103.4_40_61_+ 40–61 192.00 98.97 0.83 99.48 MIR375-201 miRNA skeletal muscle tissue (Tissue)
ENST00000362104.3 ENST00000362104.3_59_80_+ 59–80 3468.00 11.83 15.04 100.0 MIR30E-201 miRNA skeletal muscle tissue (Tissue)
ENST00000362104.3 ENST00000362104.3_17_40_+ 17–40 23984.00 81.81 104.02 100.0 MIR30E-201 miRNA skeletal muscle tissue (Tissue)
ENST00000362111.4 ENST00000362111.4_42_63_+ 42–63 142.00 63.11 0.62 100.0 MIR29A-201 miRNA skeletal muscle tissue (Tissue)
ENST00000362114.1 ENST00000362114.1_18_39_+ 18–39 1226.00 79.77 5.32 100.0 MIR345-201 miRNA skeletal muscle tissue (Tissue)
ENST00000362117.1 ENST00000362117.1_10_31_+ 10–31 46836.00 98.54 203.12 100.0 MIR16-2-201 miRNA skeletal muscle tissue (Tissue)
ENST00000362125.3 ENST00000362125.3_58_80_+ 58–80 137.00 2.79 0.59 100.0 MIR340-201 miRNA skeletal muscle tissue (Tissue)
ENST00000362125.3 ENST00000362125.3_16_37_+ 16–37 4487.00 91.48 19.46 100.0 MIR340-201 miRNA skeletal muscle tissue (Tissue)
ENST00000362127.2 ENST00000362127.2_50_71_+ 50–71 7021.00 82.96 30.45 100.0 MIR107-201 miRNA skeletal muscle tissue (Tissue)