ENCFF001RMI

Library Details

Organism: Homo Sapiens
Biosample: skeletal muscle tissue (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFZ
Description: Part of ENCODE experiment ENCSR000AFZ. The libraries contained in this experiment come from human fetal skeletal muscle tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000557108.6 ENST00000557108.6_4526_4587_+ 4526–4587 18550.00 40.99 80.45 100.0 SNHG14-220 retained intron skeletal muscle tissue (Tissue)
ENST00000557108.6 ENST00000557108.6_4551_4587_+ 4551–4587 333.00 0.74 1.44 100.0 SNHG14-220 retained intron skeletal muscle tissue (Tissue)
ENST00000557108.6 ENST00000557108.6_1419_1490_+ 1419–1490 24039.00 53.12 104.25 100.0 SNHG14-220 retained intron skeletal muscle tissue (Tissue)
ENST00000559466.1 ENST00000559466.1_665_676_+ 665–676 3051.00 99.25 13.23 100.0 TEKT4P2-201 transcribed unprocessed pseudogene skeletal muscle tissue (Tissue)
ENST00000561554.5 ENST00000561554.5_276_344_+ 276–344 54602.00 93.33 236.80 98.28 RPL4-202 retained intron skeletal muscle tissue (Tissue)
ENST00000561554.5 ENST00000561554.5_316_344_+ 316–344 195.00 0.33 0.85 100.0 RPL4-202 retained intron skeletal muscle tissue (Tissue)
ENST00000561554.5 ENST00000561554.5_276_317_+ 276–317 89.00 0.15 0.39 100.0 RPL4-202 retained intron skeletal muscle tissue (Tissue)
ENST00000561554.5 ENST00000561554.5_276_321_+ 276–321 8.00 0.01 0.03 100.0 RPL4-202 retained intron skeletal muscle tissue (Tissue)
ENST00000561554.5 ENST00000561554.5_311_344_+ 311–344 261.00 0.45 1.13 100.0 RPL4-202 retained intron skeletal muscle tissue (Tissue)
ENST00000563103.1 ENST00000563103.1_221_256_+ 221–256 3.00 0.03 0.01 100.0 ENST00000563103 lncRNA skeletal muscle tissue (Tissue)
ENST00000564647.5 ENST00000564647.5_345_386_+ 345–386 45.00 0.35 0.20 100.0 RPL4-207 retained intron skeletal muscle tissue (Tissue)
ENST00000564647.5 ENST00000564647.5_318_386_+ 318–386 10349.00 80.00 44.88 100.0 RPL4-207 retained intron skeletal muscle tissue (Tissue)
ENST00000565336.1 ENST00000565336.1_446_487_+ 446–487 2247.00 8.20 9.75 73.62 ENST00000565336 lncRNA skeletal muscle tissue (Tissue)
ENST00000565336.1 ENST00000565336.1_451_487_+ 451–487 21507.00 78.52 93.27 94.96 ENST00000565336 lncRNA skeletal muscle tissue (Tissue)
ENST00000565907.1 ENST00000565907.1_307_388_+ 307–388 283.00 0.11 1.23 100.0 RBMX-210 retained intron skeletal muscle tissue (Tissue)
ENST00000565907.1 ENST00000565907.1_307_354_+ 307–354 909.00 0.35 3.94 100.0 RBMX-210 retained intron skeletal muscle tissue (Tissue)
ENST00000565907.1 ENST00000565907.1_307_350_+ 307–350 1337.00 0.52 5.80 100.0 RBMX-210 retained intron skeletal muscle tissue (Tissue)
ENST00000565907.1 ENST00000565907.1_307_381_+ 307–381 218860.00 84.46 949.17 87.42 RBMX-210 retained intron skeletal muscle tissue (Tissue)
ENST00000567229.5 ENST00000567229.5_485_573_+ 485–573 2979.00 53.19 12.92 100.0 RPL4-214 retained intron skeletal muscle tissue (Tissue)
ENST00000567229.5 ENST00000567229.5_1097_1162_+ 1097–1162 1039.00 18.55 4.51 100.0 RPL4-214 retained intron skeletal muscle tissue (Tissue)
ENST00000569473.1 ENST00000569473.1_47_96_+ 47–96 664.00 2.26 2.88 100.0 POLG-DT-202 lncRNA skeletal muscle tissue (Tissue)
ENST00000569473.1 ENST00000569473.1_59_96_+ 59–96 10310.01 35.03 44.71 47.54 POLG-DT-202 lncRNA skeletal muscle tissue (Tissue)
ENST00000569473.1 ENST00000569473.1_61_96_+ 61–96 10897.59 37.03 47.26 50.55 POLG-DT-202 lncRNA skeletal muscle tissue (Tissue)
ENST00000570843.1 ENST00000570843.1_7_38_+ 7–38 6782.00 68.85 29.41 100.0 ENST00000570843 lncRNA skeletal muscle tissue (Tissue)
ENST00000572453.1 ENST00000572453.1_1973_1994_+ 1973–1994 734.00 57.66 3.18 100.0 MIR497HG-207 lncRNA skeletal muscle tissue (Tissue)