ENCFF001RMI

Library Details

Organism: Homo Sapiens
Biosample: skeletal muscle tissue (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFZ
Description: Part of ENCODE experiment ENCSR000AFZ. The libraries contained in this experiment come from human fetal skeletal muscle tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000497519.1 ENST00000497519.1_681_769_+ 681–769 2115.00 71.50 9.17 100.0 RPL5-205 retained intron skeletal muscle tissue (Tissue)
ENST00000497519.1 ENST00000497519.1_681_708_+ 681–708 268.00 9.06 1.16 100.0 RPL5-205 retained intron skeletal muscle tissue (Tissue)
ENST00000499525.1 ENST00000499525.1_506_558_+ 506–558 33.00 2.94 0.14 100.0 ZBED9-AS1-201 lncRNA skeletal muscle tissue (Tissue)
ENST00000507485.1 ENST00000507485.1_1149_1210_+ 1149–1210 7896.00 91.39 34.24 100.0 RPS3A-206 retained intron skeletal muscle tissue (Tissue)
ENST00000509578.1 ENST00000509578.1_1330_1389_+ 1330–1389 19778.00 94.75 85.78 100.0 COX7C-203 protein coding skeletal muscle tissue (Tissue)
ENST00000513027.3 ENST00000513027.3_272_305_+ 272–305 1306.00 1.12 5.66 82.29 RACK1-229 protein coding skeletal muscle tissue (Tissue)
ENST00000513027.3 ENST00000513027.3_263_305_+ 263–305 370.00 0.32 1.60 100.0 RACK1-229 protein coding skeletal muscle tissue (Tissue)
ENST00000513027.3 ENST00000513027.3_241_308_+ 241–308 20215.74 17.29 87.67 25.13 RACK1-229 protein coding skeletal muscle tissue (Tissue)
ENST00000513027.3 ENST00000513027.3_241_306_+ 241–306 93051.11 79.58 403.55 83.88 RACK1-229 protein coding skeletal muscle tissue (Tissue)
ENST00000513060.5 ENST00000513060.5_713_786_+ 713–786 37280.00 21.45 161.68 55.13 RACK1-230 retained intron skeletal muscle tissue (Tissue)
ENST00000513060.5 ENST00000513060.5_712_783_+ 712–783 134180.00 77.21 581.93 93.9 RACK1-230 retained intron skeletal muscle tissue (Tissue)
ENST00000516201.1 ENST00000516201.1_1_30_+ 1–30 554.00 80.99 2.40 100.0 SCARNA5-201 scaRNA skeletal muscle tissue (Tissue)
ENST00000516507.1 ENST00000516507.1_1_26_+ 1–26 221.00 0.22 0.96 100.0 RNY4-201 misc RNA skeletal muscle tissue (Tissue)
ENST00000516507.1 ENST00000516507.1_1_90_+ 1–90 8405.00 8.40 36.45 100.0 RNY4-201 misc RNA skeletal muscle tissue (Tissue)
ENST00000516507.1 ENST00000516507.1_15_32_+ 15–32 1098.00 1.10 4.76 100.0 RNY4-201 misc RNA skeletal muscle tissue (Tissue)
ENST00000516507.1 ENST00000516507.1_1_32_+ 1–32 65049.00 65.04 282.11 98.21 RNY4-201 misc RNA skeletal muscle tissue (Tissue)
ENST00000516507.1 ENST00000516507.1_41_93_+ 41–93 656.00 0.66 2.85 100.0 RNY4-201 misc RNA skeletal muscle tissue (Tissue)
ENST00000516507.1 ENST00000516507.1_48_93_+ 48–93 1205.00 1.20 5.23 93.92 RNY4-201 misc RNA skeletal muscle tissue (Tissue)
ENST00000516507.1 ENST00000516507.1_1_17_+ 1–17 106.00 0.11 0.46 100.0 RNY4-201 misc RNA skeletal muscle tissue (Tissue)
ENST00000516507.1 ENST00000516507.1_1_39_+ 1–39 1295.00 1.29 5.62 44.15 RNY4-201 misc RNA skeletal muscle tissue (Tissue)
ENST00000516507.1 ENST00000516507.1_67_93_+ 67–93 5336.00 5.34 23.14 84.6 RNY4-201 misc RNA skeletal muscle tissue (Tissue)
ENST00000516507.1 ENST00000516507.1_1_36_+ 1–36 4176.00 4.18 18.11 77.88 RNY4-201 misc RNA skeletal muscle tissue (Tissue)
ENST00000516507.1 ENST00000516507.1_1_48_+ 1–48 255.00 0.25 1.11 100.0 RNY4-201 misc RNA skeletal muscle tissue (Tissue)
ENST00000516507.1 ENST00000516507.1_54_93_+ 54–93 124.00 0.12 0.54 68.89 RNY4-201 misc RNA skeletal muscle tissue (Tissue)
ENST00000517927.2 ENST00000517927.2_384_405_+ 384–405 244.00 81.61 1.06 86.52 MIR3142HG-201 lncRNA skeletal muscle tissue (Tissue)