ENCFF001RMI

Library Details

Organism: Homo Sapiens
Biosample: skeletal muscle tissue (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFZ
Description: Part of ENCODE experiment ENCSR000AFZ. The libraries contained in this experiment come from human fetal skeletal muscle tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000484610.5 ENST00000484610.5_392_433_+ 392–433 600.00 1.75 2.60 100.0 RPL13-207 retained intron skeletal muscle tissue (Tissue)
ENST00000485101.5 ENST00000485101.5_343_393_+ 343–393 1510.00 0.30 6.55 51.91 EIF4A2-219 retained intron skeletal muscle tissue (Tissue)
ENST00000485101.5 ENST00000485101.5_365_405_+ 365–405 3807.00 0.76 16.51 73.75 EIF4A2-219 retained intron skeletal muscle tissue (Tissue)
ENST00000485101.5 ENST00000485101.5_348_405_+ 348–405 352.00 0.07 1.53 26.53 EIF4A2-219 retained intron skeletal muscle tissue (Tissue)
ENST00000485101.5 ENST00000485101.5_362_405_+ 362–405 579.00 0.12 2.51 55.14 EIF4A2-219 retained intron skeletal muscle tissue (Tissue)
ENST00000485101.5 ENST00000485101.5_343_434_+ 343–434 7.00 0.00 0.03 100.0 EIF4A2-219 retained intron skeletal muscle tissue (Tissue)
ENST00000485101.5 ENST00000485101.5_343_400_+ 343–400 1785.00 0.36 7.74 85.49 EIF4A2-219 retained intron skeletal muscle tissue (Tissue)
ENST00000485101.5 ENST00000485101.5_360_408_+ 360–408 44.00 0.01 0.19 49.44 EIF4A2-219 retained intron skeletal muscle tissue (Tissue)
ENST00000485101.5 ENST00000485101.5_343_390_+ 343–390 2943.00 0.59 12.76 85.21 EIF4A2-219 retained intron skeletal muscle tissue (Tissue)
ENST00000485101.5 ENST00000485101.5_343_408_+ 343–408 70459.00 14.08 305.57 82.74 EIF4A2-219 retained intron skeletal muscle tissue (Tissue)
ENST00000485101.5 ENST00000485101.5_343_413_+ 343–413 379.00 0.08 1.64 100.0 EIF4A2-219 retained intron skeletal muscle tissue (Tissue)
ENST00000485101.5 ENST00000485101.5_343_405_+ 343–405 406004.00 81.14 1760.80 99.11 EIF4A2-219 retained intron skeletal muscle tissue (Tissue)
ENST00000485101.5 ENST00000485101.5_343_418_+ 343–418 1145.00 0.23 4.97 100.0 EIF4A2-219 retained intron skeletal muscle tissue (Tissue)
ENST00000485101.5 ENST00000485101.5_365_408_+ 365–408 366.00 0.07 1.59 56.39 EIF4A2-219 retained intron skeletal muscle tissue (Tissue)
ENST00000485101.5 ENST00000485101.5_2108_2152_+ 2108–2152 159.00 0.03 0.69 100.0 EIF4A2-219 retained intron skeletal muscle tissue (Tissue)
ENST00000485101.5 ENST00000485101.5_343_376_+ 343–376 446.00 0.09 1.93 100.0 EIF4A2-219 retained intron skeletal muscle tissue (Tissue)
ENST00000485390.5 ENST00000485390.5_230_303_+ 230–303 20210.00 97.05 87.65 100.0 RPS8-207 protein coding CDS not defined skeletal muscle tissue (Tissue)
ENST00000485706.5 ENST00000485706.5_456_485_+ 456–485 73.00 6.00 0.32 100.0 RPL7A-206 protein coding CDS not defined skeletal muscle tissue (Tissue)
ENST00000485706.5 ENST00000485706.5_486_524_+ 486–524 206.00 16.94 0.89 100.0 RPL7A-206 protein coding CDS not defined skeletal muscle tissue (Tissue)
ENST00000485706.5 ENST00000485706.5_456_524_+ 456–524 390.00 32.07 1.69 100.0 RPL7A-206 protein coding CDS not defined skeletal muscle tissue (Tissue)
ENST00000485756.1 ENST00000485756.1_123_189_+ 123–189 504321.00 83.45 2187.19 99.27 RPL21-209 retained intron skeletal muscle tissue (Tissue)
ENST00000485756.1 ENST00000485756.1_173_189_+ 173–189 1104.00 0.18 4.79 100.0 RPL21-209 retained intron skeletal muscle tissue (Tissue)
ENST00000485756.1 ENST00000485756.1_123_168_+ 123–168 1623.00 0.27 7.04 100.0 RPL21-209 retained intron skeletal muscle tissue (Tissue)
ENST00000485756.1 ENST00000485756.1_138_189_+ 138–189 1373.00 0.23 5.95 100.0 RPL21-209 retained intron skeletal muscle tissue (Tissue)
ENST00000485756.1 ENST00000485756.1_122_192_+ 122–192 91453.00 15.13 396.62 99.55 RPL21-209 retained intron skeletal muscle tissue (Tissue)