ENCFF001RMI

Library Details

Organism: Homo Sapiens
Biosample: skeletal muscle tissue (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFZ
Description: Part of ENCODE experiment ENCSR000AFZ. The libraries contained in this experiment come from human fetal skeletal muscle tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000391145.1 ENST00000391145.1_18_97_+ 18–97 55191.00 93.44 239.36 100.0 SNORD90-201 snoRNA skeletal muscle tissue (Tissue)
ENST00000391145.1 ENST00000391145.1_18_100_+ 18–100 2007.00 3.40 8.70 40.74 SNORD90-201 snoRNA skeletal muscle tissue (Tissue)
ENST00000391150.1 ENST00000391150.1_9_35_+ 9–35 1079.00 1.51 4.68 100.0 SNORD69-201 snoRNA skeletal muscle tissue (Tissue)
ENST00000391150.1 ENST00000391150.1_9_48_+ 9–48 1052.00 1.48 4.56 100.0 SNORD69-201 snoRNA skeletal muscle tissue (Tissue)
ENST00000391150.1 ENST00000391150.1_9_69_+ 9–69 64770.00 90.92 280.90 100.0 SNORD69-201 snoRNA skeletal muscle tissue (Tissue)
ENST00000391150.1 ENST00000391150.1_35_69_+ 35–69 1504.00 2.11 6.52 100.0 SNORD69-201 snoRNA skeletal muscle tissue (Tissue)
ENST00000391232.1 ENST00000391232.1_9_80_+ 9–80 1223.00 46.54 5.30 61.06 SNORD70-201 snoRNA skeletal muscle tissue (Tissue)
ENST00000393354.7 ENST00000393354.7_8003_8016_+ 8003–8016 5124.00 61.77 22.22 71.78 B4GALNT2-202 protein coding skeletal muscle tissue (Tissue)
ENST00000393354.7 ENST00000393354.7_7988_8016_+ 7988–8016 242.00 2.92 1.05 100.0 B4GALNT2-202 protein coding skeletal muscle tissue (Tissue)
ENST00000396355.5 ENST00000396355.5_35_56_+ 35–56 1775.00 94.36 7.70 100.0 NDE1-202 protein coding skeletal muscle tissue (Tissue)
ENST00000401172.1 ENST00000401172.1_46_67_+ 46–67 2101.00 93.09 9.11 100.0 MIR208B-201 miRNA skeletal muscle tissue (Tissue)
ENST00000401182.3 ENST00000401182.3_11_31_+ 11–31 2280.00 61.51 9.89 100.0 MIR450B-201 miRNA skeletal muscle tissue (Tissue)
ENST00000401258.3 ENST00000401258.3_48_71_+ 48–71 563.00 52.67 2.44 100.0 MIR887-201 miRNA skeletal muscle tissue (Tissue)
ENST00000401280.3 ENST00000401280.3_49_69_+ 49–69 16480.00 89.51 71.47 100.0 MIR889-201 miRNA skeletal muscle tissue (Tissue)
ENST00000408139.1 ENST00000408139.1_5_91_+ 5–91 1966.00 79.18 8.53 100.0 SNORD111-201 snoRNA skeletal muscle tissue (Tissue)
ENST00000408314.1 ENST00000408314.1_5_86_+ 5–86 1995.00 63.25 8.65 79.2 SNORD88A-201 snoRNA skeletal muscle tissue (Tissue)
ENST00000408406.1 ENST00000408406.1_32_53_+ 32–53 164.00 94.25 0.71 100.0 MIR548K-201 miRNA skeletal muscle tissue (Tissue)
ENST00000408479.1 ENST00000408479.1_72_91_+ 72–91 328.00 69.05 1.42 100.0 MIR320B2-201 miRNA skeletal muscle tissue (Tissue)
ENST00000408537.1 ENST00000408537.1_15_35_+ 15–35 132.00 91.03 0.57 100.0 MIR1271-201 miRNA skeletal muscle tissue (Tissue)
ENST00000408573.1 ENST00000408573.1_26_71_+ 26–71 84.00 0.06 0.36 100.0 SNORD100-201 snoRNA skeletal muscle tissue (Tissue)
ENST00000408573.1 ENST00000408573.1_4_71_+ 4–71 126926.00 97.67 550.47 100.0 SNORD100-201 snoRNA skeletal muscle tissue (Tissue)
ENST00000408573.1 ENST00000408573.1_4_36_+ 4–36 606.00 0.47 2.63 100.0 SNORD100-201 snoRNA skeletal muscle tissue (Tissue)
ENST00000408573.1 ENST00000408573.1_4_52_+ 4–52 143.00 0.11 0.62 100.0 SNORD100-201 snoRNA skeletal muscle tissue (Tissue)
ENST00000408587.1 ENST00000408587.1_43_74_+ 43–74 959.00 58.83 4.16 100.0 SNORD111B-201 snoRNA skeletal muscle tissue (Tissue)
ENST00000410361.1 ENST00000410361.1_79_116_+ 79–116 10.00 0.78 0.04 100.0 RNU2-36P-201 snRNA skeletal muscle tissue (Tissue)