ENCFF001RMI

Library Details

Organism: Homo Sapiens
Biosample: skeletal muscle tissue (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFZ
Description: Part of ENCODE experiment ENCSR000AFZ. The libraries contained in this experiment come from human fetal skeletal muscle tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000387459.1 ENST00000387459.1_39_69_+ 39–69 631.00 0.30 2.74 95.75 MT-TE-201 Mt tRNA skeletal muscle tissue (Tissue)
ENST00000387459.1 ENST00000387459.1_24_69_+ 24–69 888.00 0.43 3.85 100.0 MT-TE-201 Mt tRNA skeletal muscle tissue (Tissue)
ENST00000387459.1 ENST00000387459.1_1_69_+ 1–69 183328.00 88.15 795.08 93.16 MT-TE-201 Mt tRNA skeletal muscle tissue (Tissue)
ENST00000387459.1 ENST00000387459.1_1_57_+ 1–57 106.00 0.05 0.46 100.0 MT-TE-201 Mt tRNA skeletal muscle tissue (Tissue)
ENST00000388006.1 ENST00000388006.1_7_28_+ 7–28 1685.00 58.28 7.31 100.0 MIR196A1-201 miRNA skeletal muscle tissue (Tissue)
ENST00000389680.2 ENST00000389680.2_316_354_+ 316–354 175.00 8.19 0.76 100.0 MT-RNR1-201 Mt rRNA skeletal muscle tissue (Tissue)
ENST00000389680.2 ENST00000389680.2_2_90_+ 2–90 144.00 6.74 0.62 100.0 MT-RNR1-201 Mt rRNA skeletal muscle tissue (Tissue)
ENST00000390180.1 ENST00000390180.1_64_86_+ 64–86 1171.00 80.04 5.08 100.0 MIR454-201 miRNA skeletal muscle tissue (Tissue)
ENST00000390204.1 ENST00000390204.1_51_72_+ 51–72 3051.00 47.50 13.23 100.0 MIR501-201 miRNA skeletal muscle tissue (Tissue)
ENST00000390225.1 ENST00000390225.1_30_51_+ 30–51 2837.00 88.16 12.30 100.0 MIR769-201 miRNA skeletal muscle tissue (Tissue)
ENST00000390689.3 ENST00000390689.3_37_51_+ 37–51 48.00 78.69 0.21 100.0 KRTAP19-1-201 protein coding skeletal muscle tissue (Tissue)
ENST00000390708.1 ENST00000390708.1_11_33_+ 11–33 519.00 35.21 2.25 100.0 MIR708-201 miRNA skeletal muscle tissue (Tissue)
ENST00000390725.1 ENST00000390725.1_44_66_+ 44–66 82.00 91.11 0.36 100.0 MIR509-3-201 miRNA skeletal muscle tissue (Tissue)
ENST00000390751.3 ENST00000390751.3_47_68_+ 47–68 8321.00 75.57 36.09 100.0 MIR543-201 miRNA skeletal muscle tissue (Tissue)
ENST00000390813.1 ENST00000390813.1_45_67_+ 45–67 629.00 94.30 2.73 100.0 MIR301B-201 miRNA skeletal muscle tissue (Tissue)
ENST00000390851.1 ENST00000390851.1_150_165_+ 150–165 467.00 30.99 2.03 72.63 RNU1-82P-201 snRNA skeletal muscle tissue (Tissue)
ENST00000390856.1 ENST00000390856.1_1_75_+ 1–75 3133.00 32.07 13.59 100.0 SNORD66-201 snoRNA skeletal muscle tissue (Tissue)
ENST00000390856.1 ENST00000390856.1_1_59_+ 1–59 393.00 4.02 1.70 100.0 SNORD66-201 snoRNA skeletal muscle tissue (Tissue)
ENST00000390856.1 ENST00000390856.1_25_76_+ 25–76 21.00 0.21 0.09 100.0 SNORD66-201 snoRNA skeletal muscle tissue (Tissue)
ENST00000390856.1 ENST00000390856.1_48_74_+ 48–74 2849.00 29.17 12.36 82.48 SNORD66-201 snoRNA skeletal muscle tissue (Tissue)
ENST00000390880.2 ENST00000390880.2_45_67_+ 45–67 1165.00 79.63 5.05 100.0 U3.17-201 snoRNA skeletal muscle tissue (Tissue)
ENST00000390930.1 ENST00000390930.1_207_235_+ 207–235 2142.00 67.15 9.29 100.0 SNORD17-201 snoRNA skeletal muscle tissue (Tissue)
ENST00000390994.1 ENST00000390994.1_6_74_+ 6–74 429.00 70.56 1.86 100.0 SNORD72-201 snoRNA skeletal muscle tissue (Tissue)
ENST00000391007.1 ENST00000391007.1_9_77_+ 9–77 2429.00 79.80 10.53 100.0 SNORD70B-201 snoRNA skeletal muscle tissue (Tissue)
ENST00000391107.1 ENST00000391107.1_62_87_+ 62–87 2430.00 57.54 10.54 96.66 RNY4P18-201 misc RNA skeletal muscle tissue (Tissue)