ENCFF001RMH

Library Details

Organism: Homo Sapiens
Biosample: lung (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFW
Description: Part of ENCODE experiment ENCSR000AFW. The libraries contained in this experiment come from human fetal lung tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000668505.1 ENST00000668505.1_988_1033_+ 988–1033 1103.00 0.28 2.50 100.0 SNHG5-273 lncRNA lung (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1353_+ 1278–1353 212888.75 53.97 482.78 61.99 SNHG5-273 lncRNA lung (Tissue)
ENST00000668505.1 ENST00000668505.1_988_1056_+ 988–1056 20801.00 5.27 47.17 87.69 SNHG5-273 lncRNA lung (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1315_+ 1278–1315 418.00 0.11 0.95 100.0 SNHG5-273 lncRNA lung (Tissue)
ENST00000668505.1 ENST00000668505.1_1279_1308_+ 1279–1308 2603.00 0.66 5.90 100.0 SNHG5-273 lncRNA lung (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1340_+ 1278–1340 53.00 0.01 0.12 100.0 SNHG5-273 lncRNA lung (Tissue)
ENST00000668505.1 ENST00000668505.1_1272_1352_+ 1272–1352 6.00 0.00 0.01 100.0 SNHG5-273 lncRNA lung (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1361_+ 1278–1361 3340.00 0.85 7.57 99.23 SNHG5-273 lncRNA lung (Tissue)
ENST00000669673.1 ENST00000669673.1_3794_3884_+ 3794–3884 1859.00 13.23 4.22 64.1 SNHG14-323 lncRNA lung (Tissue)
ENST00000670680.1 ENST00000670680.1_2_69_+ 2–69 349026.00 95.31 791.51 99.02 MEG8-251 lncRNA lung (Tissue)
ENST00000670680.1 ENST00000670680.1_34_69_+ 34–69 1616.00 0.44 3.66 67.62 MEG8-251 lncRNA lung (Tissue)
ENST00000670680.1 ENST00000670680.1_36_69_+ 36–69 1091.00 0.30 2.47 43.76 MEG8-251 lncRNA lung (Tissue)
ENST00000670680.1 ENST00000670680.1_1539_1602_+ 1539–1602 4886.00 1.33 11.08 87.58 MEG8-251 lncRNA lung (Tissue)
ENST00000670680.1 ENST00000670680.1_10_70_+ 10–70 546.00 0.15 1.24 100.0 MEG8-251 lncRNA lung (Tissue)
ENST00000670697.1 ENST00000670697.1_226_313_+ 226–313 2.00 0.00 0.00 100.0 SNHG14-336 lncRNA lung (Tissue)
ENST00000670697.1 ENST00000670697.1_233_310_+ 233–310 43078.00 61.23 97.69 88.42 SNHG14-336 lncRNA lung (Tissue)
ENST00000670697.1 ENST00000670697.1_232_313_+ 232–313 24058.00 34.20 54.56 56.22 SNHG14-336 lncRNA lung (Tissue)
ENST00000671491.1 ENST00000671491.1_1778_1868_+ 1778–1868 17425.00 66.13 39.52 94.92 SNHG14-341 lncRNA lung (Tissue)
ENST00000676514.1 ENST00000676514.1_1978_2054_+ 1978–2054 46.00 1.73 0.10 100.0 NCL-211 retained intron lung (Tissue)
ENST00000679646.1 ENST00000679646.1_899_921_+ 899–921 7.00 6.86 0.02 100.0 FMN2-209 protein coding CDS not defined lung (Tissue)
ENST00000685142.3 ENST00000685142.3_1449_1480_+ 1449–1480 2.00 0.07 0.00 100.0 LINC02739-203 lncRNA lung (Tissue)
ENST00000685142.3 ENST00000685142.3_1409_1423_+ 1409–1423 133.00 4.80 0.30 63.64 LINC02739-203 lncRNA lung (Tissue)
ENST00000685142.3 ENST00000685142.3_1421_1436_+ 1421–1436 241.00 8.69 0.55 100.0 LINC02739-203 lncRNA lung (Tissue)
ENST00000685142.3 ENST00000685142.3_1409_1440_+ 1409–1440 794.00 28.63 1.80 100.0 LINC02739-203 lncRNA lung (Tissue)
ENST00000685142.3 ENST00000685142.3_1405_1444_+ 1405–1444 12.00 0.43 0.03 100.0 LINC02739-203 lncRNA lung (Tissue)