ENCFF001RMH

Library Details

Organism: Homo Sapiens
Biosample: lung (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFW
Description: Part of ENCODE experiment ENCSR000AFW. The libraries contained in this experiment come from human fetal lung tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000668048.2 ENST00000668048.2_523_584_+ 523–584 532.00 0.02 1.21 100.0 SNHG1-248 lncRNA lung (Tissue)
ENST00000668048.2 ENST00000668048.2_287_322_+ 287–322 883.00 0.03 2.00 100.0 SNHG1-248 lncRNA lung (Tissue)
ENST00000668048.2 ENST00000668048.2_2157_2173_+ 2157–2173 31552.00 1.18 71.55 100.0 SNHG1-248 lncRNA lung (Tissue)
ENST00000668048.2 ENST00000668048.2_258_296_+ 258–296 282.00 0.01 0.64 100.0 SNHG1-248 lncRNA lung (Tissue)
ENST00000668048.2 ENST00000668048.2_2184_2223_+ 2184–2223 2791.00 0.10 6.33 100.0 SNHG1-248 lncRNA lung (Tissue)
ENST00000668048.2 ENST00000668048.2_258_324_+ 258–324 51741.00 1.94 117.34 62.76 SNHG1-248 lncRNA lung (Tissue)
ENST00000668048.2 ENST00000668048.2_2507_2560_+ 2507–2560 1503.00 0.06 3.41 100.0 SNHG1-248 lncRNA lung (Tissue)
ENST00000668048.2 ENST00000668048.2_524_594_+ 524–594 467488.00 17.49 1060.16 98.04 SNHG1-248 lncRNA lung (Tissue)
ENST00000668048.2 ENST00000668048.2_2514_2560_+ 2514–2560 2362.00 0.09 5.36 100.0 SNHG1-248 lncRNA lung (Tissue)
ENST00000668048.2 ENST00000668048.2_1936_1982_+ 1936–1982 837.00 0.03 1.90 100.0 SNHG1-248 lncRNA lung (Tissue)
ENST00000668048.2 ENST00000668048.2_517_596_+ 517–596 2.00 0.00 0.00 100.0 SNHG1-248 lncRNA lung (Tissue)
ENST00000668048.2 ENST00000668048.2_806_874_+ 806–874 174796.00 6.54 396.40 100.0 SNHG1-248 lncRNA lung (Tissue)
ENST00000668048.2 ENST00000668048.2_1953_1982_+ 1953–1982 2041.00 0.08 4.63 82.63 SNHG1-248 lncRNA lung (Tissue)
ENST00000668048.2 ENST00000668048.2_523_579_+ 523–579 1028.53 0.04 2.33 56.02 SNHG1-248 lncRNA lung (Tissue)
ENST00000668048.2 ENST00000668048.2_565_594_+ 565–594 1157.00 0.04 2.62 100.0 SNHG1-248 lncRNA lung (Tissue)
ENST00000668048.2 ENST00000668048.2_1949_1982_+ 1949–1982 2118.00 0.08 4.80 64.01 SNHG1-248 lncRNA lung (Tissue)
ENST00000668048.2 ENST00000668048.2_2160_2223_+ 2160–2223 1285.00 0.05 2.91 100.0 SNHG1-248 lncRNA lung (Tissue)
ENST00000668048.2 ENST00000668048.2_1921_1978_+ 1921–1978 765.00 0.03 1.73 100.0 SNHG1-248 lncRNA lung (Tissue)
ENST00000668048.2 ENST00000668048.2_1194_1265_+ 1194–1265 376.00 0.01 0.85 100.0 SNHG1-248 lncRNA lung (Tissue)
ENST00000668419.1 ENST00000668419.1_3471_3561_+ 3471–3561 148719.00 38.95 337.26 100.0 SNHG14-315 lncRNA lung (Tissue)
ENST00000668419.1 ENST00000668419.1_1471_1561_+ 1471–1561 89518.00 23.45 203.01 91.87 SNHG14-315 lncRNA lung (Tissue)
ENST00000668419.1 ENST00000668419.1_2_92_+ 2–92 98100.00 25.69 222.47 86.29 SNHG14-315 lncRNA lung (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1322_+ 1278–1322 2238.00 0.57 5.08 100.0 SNHG5-273 lncRNA lung (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1351_+ 1278–1351 130319.15 33.03 295.54 40.91 SNHG5-273 lncRNA lung (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1337_+ 1278–1337 1526.00 0.39 3.46 100.0 SNHG5-273 lncRNA lung (Tissue)