ENCFF001RMH

Library Details

Organism: Homo Sapiens
Biosample: lung (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFW
Description: Part of ENCODE experiment ENCSR000AFW. The libraries contained in this experiment come from human fetal lung tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000650796.1 ENST00000650796.1_1641_1722_+ 1641–1722 2.00 0.00 0.00 100.0 GAS5-230 retained intron lung (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1118_+ 1048–1118 288.00 0.02 0.65 100.0 GAS5-230 retained intron lung (Tissue)
ENST00000651140.1 ENST00000651140.1_696_716_+ 696–716 1136.00 20.27 2.58 100.0 FTX-219 lncRNA lung (Tissue)
ENST00000651140.1 ENST00000651140.1_890_912_+ 890–912 1851.00 33.02 4.20 85.22 FTX-219 lncRNA lung (Tissue)
ENST00000651323.1 ENST00000651323.1_5199_5247_+ 5199–5247 241.00 9.82 0.55 46.08 CTC1-214 protein coding lung (Tissue)
ENST00000651323.1 ENST00000651323.1_5233_5247_+ 5233–5247 11.00 0.45 0.02 18.64 CTC1-214 protein coding lung (Tissue)
ENST00000651323.1 ENST00000651323.1_5163_5174_+ 5163–5174 214.00 8.72 0.49 51.57 CTC1-214 protein coding lung (Tissue)
ENST00000651323.1 ENST00000651323.1_5201_5247_+ 5201–5247 282.00 11.50 0.64 53.92 CTC1-214 protein coding lung (Tissue)
ENST00000651323.1 ENST00000651323.1_5163_5177_+ 5163–5177 349.00 14.23 0.79 86.17 CTC1-214 protein coding lung (Tissue)
ENST00000651323.1 ENST00000651323.1_5214_5247_+ 5214–5247 74.00 3.02 0.17 100.0 CTC1-214 protein coding lung (Tissue)
ENST00000651323.1 ENST00000651323.1_5163_5185_+ 5163–5185 104.00 4.24 0.24 100.0 CTC1-214 protein coding lung (Tissue)
ENST00000651323.1 ENST00000651323.1_5230_5247_+ 5230–5247 125.00 5.10 0.28 100.0 CTC1-214 protein coding lung (Tissue)
ENST00000651540.1 ENST00000651540.1_6_45_+ 6–45 3257.00 1.31 7.39 72.51 ENST00000651540 lncRNA lung (Tissue)
ENST00000651540.1 ENST00000651540.1_57_88_+ 57–88 4692.00 1.88 10.64 98.84 ENST00000651540 lncRNA lung (Tissue)
ENST00000651540.1 ENST00000651540.1_6_55_+ 6–55 3320.00 1.33 7.53 100.0 ENST00000651540 lncRNA lung (Tissue)
ENST00000651540.1 ENST00000651540.1_6_33_+ 6–33 9141.00 3.67 20.73 57.56 ENST00000651540 lncRNA lung (Tissue)
ENST00000651540.1 ENST00000651540.1_70_88_+ 70–88 1103.00 0.44 2.50 100.0 ENST00000651540 lncRNA lung (Tissue)
ENST00000651540.1 ENST00000651540.1_6_75_+ 6–75 835.00 0.34 1.89 100.0 ENST00000651540 lncRNA lung (Tissue)
ENST00000651540.1 ENST00000651540.1_6_79_+ 6–79 562.00 0.23 1.27 100.0 ENST00000651540 lncRNA lung (Tissue)
ENST00000651540.1 ENST00000651540.1_6_28_+ 6–28 4805.00 1.93 10.90 100.0 ENST00000651540 lncRNA lung (Tissue)
ENST00000651540.1 ENST00000651540.1_6_88_+ 6–88 2718.00 1.09 6.16 100.0 ENST00000651540 lncRNA lung (Tissue)
ENST00000651540.1 ENST00000651540.1_6_36_+ 6–36 36376.00 14.61 82.49 54.82 ENST00000651540 lncRNA lung (Tissue)
ENST00000651540.1 ENST00000651540.1_6_51_+ 6–51 45550.00 18.29 103.30 100.0 ENST00000651540 lncRNA lung (Tissue)
ENST00000651540.1 ENST00000651540.1_6_39_+ 6–39 60935.00 24.47 138.19 54.58 ENST00000651540 lncRNA lung (Tissue)
ENST00000651540.1 ENST00000651540.1_1_88_+ 1–88 1.00 0.00 0.00 100.0 ENST00000651540 lncRNA lung (Tissue)