ENCFF001RMG

Library Details

Organism: Homo Sapiens
Biosample: parietal lobe (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFY
Description: Part of ENCODE experiment ENCSR000AFY. The libraries contained in this experiment come from human fetal parietal lobe tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR17-68019897 tRNA-transcript-chr17-68019897_1_33_+ 1–33 52.00 35.37 0.22 100.0 TRNA-TRANSCRIPT-CHR17-68019897 Arg tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHR17-75033906 tRNA-transcript-chr17-75033906_12_29_+ 12–29 92.00 66.19 0.39 100.0 TRNA-TRANSCRIPT-CHR17-75033906 Arg tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHR17-75035113 tRNA-transcript-chr17-75035113_1_33_+ 1–33 46.00 25.27 0.20 100.0 TRNA-TRANSCRIPT-CHR17-75035113 Arg tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_8_53_+ 8–53 17.00 0.15 0.07 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_21_72_+ 21–72 31.00 0.27 0.13 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_17_54_+ 17–54 13.00 0.11 0.06 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_1_34_+ 1–34 315.00 2.76 1.34 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_1_49_+ 1–49 113.00 0.99 0.48 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_34_53_+ 34–53 56.00 0.49 0.24 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHR17-8125746 tRNA-transcript-chr17-8125746_1_52_+ 1–52 2179.00 2.86 9.26 97.71 TRNA-TRANSCRIPT-CHR17-8125746 Gly tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHR17-8125746 tRNA-transcript-chr17-8125746_13_32_+ 13–32 94.00 0.12 0.40 68.12 TRNA-TRANSCRIPT-CHR17-8125746 Gly tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHR17-8125746 tRNA-transcript-chr17-8125746_10_32_+ 10–32 33.00 0.04 0.14 55.0 TRNA-TRANSCRIPT-CHR17-8125746 Gly tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHR17-8222238 tRNA-transcript-chr17-8222238_1_33_+ 1–33 190.00 12.54 0.81 28.57 TRNA-TRANSCRIPT-CHR17-8222238 Asp tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHR1-7930279 tRNA-transcript-chr1-7930279_1_33_+ 1–33 131.00 92.25 0.56 100.0 TRNA-TRANSCRIPT-CHR1-7930279 Pseudo tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHR19-45478602 tRNA-transcript-chr19-45478602_1_37_+ 1–37 178.00 25.57 0.76 93.68 TRNA-TRANSCRIPT-CHR19-45478602 SeC(e) tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHR20-45322361 tRNA-transcript-chr20-45322361_1_33_+ 1–33 17.00 80.95 0.07 100.0 TRNA-TRANSCRIPT-CHR20-45322361 Pseudo tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHR21-17454789 tRNA-transcript-chr21-17454789_3_52_+ 3–52 43.00 0.68 0.18 61.43 TRNA-TRANSCRIPT-CHR21-17454789 Gly tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHR21-17454789 tRNA-transcript-chr21-17454789_1_52_+ 1–52 27.00 0.43 0.11 38.57 TRNA-TRANSCRIPT-CHR21-17454789 Gly tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHR21-17454789 tRNA-transcript-chr21-17454789_1_32_+ 1–32 2063.00 32.54 8.77 73.68 TRNA-TRANSCRIPT-CHR21-17454789 Gly tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHR2-130337128 tRNA-transcript-chr2-130337128_1_35_+ 1–35 877.73 14.83 3.73 35.49 TRNA-TRANSCRIPT-CHR2-130337128 Glu tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHR2-130337128 tRNA-transcript-chr2-130337128_1_28_+ 1–28 430.00 7.26 1.83 45.94 TRNA-TRANSCRIPT-CHR2-130337128 Glu tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHR2-130337128 tRNA-transcript-chr2-130337128_1_33_+ 1–33 1734.27 29.30 7.37 73.3 TRNA-TRANSCRIPT-CHR2-130337128 Glu tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHR2-203364408 tRNA-transcript-chr2-203364408_2_32_+ 2–32 4619.00 86.06 19.63 94.52 TRNA-TRANSCRIPT-CHR2-203364408 Pseudo tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHR3-104160680 tRNA-transcript-chr3-104160680_12_33_+ 12–33 8.00 2.04 0.03 100.0 TRNA-TRANSCRIPT-CHR3-104160680 Pseudo tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHR5-181188854 tRNA-transcript-chr5-181188854_1_32_+ 1–32 174.00 12.67 0.74 95.08 TRNA-TRANSCRIPT-CHR5-181188854 Pro tRNA parietal lobe (Tissue)