ENCFF001RMG

Library Details

Organism: Homo Sapiens
Biosample: parietal lobe (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFY
Description: Part of ENCODE experiment ENCSR000AFY. The libraries contained in this experiment come from human fetal parietal lobe tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000261038.6 ENST00000261038.6_3100_3122_+ 3100–3122 3168.00 93.81 13.47 100.0 SLC49A4-201 protein coding parietal lobe (Tissue)
ENST00000284727.9 ENST00000284727.9_2255_2286_+ 2255–2286 944.00 15.34 4.01 100.0 ATP5MC3-201 protein coding parietal lobe (Tissue)
ENST00000302506.8 ENST00000302506.8_1928_1942_+ 1928–1942 251.00 94.36 1.07 100.0 CDC25A-201 protein coding parietal lobe (Tissue)
ENST00000320776.5 ENST00000320776.5_289_301_+ 289–301 45.00 83.33 0.19 100.0 BLOC1S4-201 protein coding parietal lobe (Tissue)
ENST00000321990.5 ENST00000321990.5_6301_6324_+ 6301–6324 310.00 8.74 1.32 100.0 ATAD5-201 protein coding parietal lobe (Tissue)
ENST00000325089.7 ENST00000325089.7_9_20_+ 9–20 355.00 54.20 1.51 100.0 SLITRK5-201 protein coding parietal lobe (Tissue)
ENST00000325418.5 ENST00000325418.5_207_220_+ 207–220 1388.00 57.93 5.90 100.0 HASPIN-201 protein coding parietal lobe (Tissue)
ENST00000327423.11 ENST00000327423.11_9327_9339_+ 9327–9339 131.00 8.10 0.56 100.0 PRR14L-201 protein coding parietal lobe (Tissue)
ENST00000336854.9 ENST00000336854.9_1124_1136_+ 1124–1136 1093.00 96.98 4.65 100.0 ATG101-201 protein coding parietal lobe (Tissue)
ENST00000345127.9 ENST00000345127.9_4554_4567_+ 4554–4567 442.00 67.17 1.88 100.0 PRICKLE1-201 protein coding parietal lobe (Tissue)
ENST00000347538.2 ENST00000347538.2_59_81_+ 59–81 54.00 98.18 0.23 100.0 MIR133A2-201 miRNA parietal lobe (Tissue)
ENST00000358769.7 ENST00000358769.7_52_66_+ 52–66 6.00 11.11 0.03 100.0 PBLD-204 protein coding parietal lobe (Tissue)
ENST00000360737.4 ENST00000360737.4_3384_3405_+ 3384–3405 292730.00 89.86 1244.22 99.45 MIRLET7BHG-201 lncRNA parietal lobe (Tissue)
ENST00000360737.4 ENST00000360737.4_4323_4344_+ 4323–4344 19342.00 5.94 82.21 91.86 MIRLET7BHG-201 lncRNA parietal lobe (Tissue)
ENST00000362103.4 ENST00000362103.4_40_58_+ 40–58 2.00 2.94 0.01 66.67 MIR375-201 miRNA parietal lobe (Tissue)
ENST00000362103.4 ENST00000362103.4_40_61_+ 40–61 66.00 97.06 0.28 100.0 MIR375-201 miRNA parietal lobe (Tissue)
ENST00000362104.3 ENST00000362104.3_59_80_+ 59–80 2312.00 5.48 9.83 100.0 MIR30E-201 miRNA parietal lobe (Tissue)
ENST00000362104.3 ENST00000362104.3_17_40_+ 17–40 37960.00 90.02 161.35 100.0 MIR30E-201 miRNA parietal lobe (Tissue)
ENST00000362111.4 ENST00000362111.4_42_63_+ 42–63 1071.00 57.46 4.55 100.0 MIR29A-201 miRNA parietal lobe (Tissue)
ENST00000362114.1 ENST00000362114.1_18_39_+ 18–39 1815.00 91.90 7.71 100.0 MIR345-201 miRNA parietal lobe (Tissue)
ENST00000362117.1 ENST00000362117.1_10_31_+ 10–31 88191.00 99.03 374.85 100.0 MIR16-2-201 miRNA parietal lobe (Tissue)
ENST00000362125.3 ENST00000362125.3_16_37_+ 16–37 40841.00 92.18 173.59 100.0 MIR340-201 miRNA parietal lobe (Tissue)
ENST00000362125.3 ENST00000362125.3_58_80_+ 58–80 1527.00 3.45 6.49 100.0 MIR340-201 miRNA parietal lobe (Tissue)
ENST00000362127.2 ENST00000362127.2_50_71_+ 50–71 7597.00 85.53 32.29 100.0 MIR107-201 miRNA parietal lobe (Tissue)
ENST00000362150.3 ENST00000362150.3_49_70_+ 49–70 8431.00 95.39 35.84 97.29 MIR381-201 miRNA parietal lobe (Tissue)