ENCFF001RMG

Library Details

Organism: Homo Sapiens
Biosample: parietal lobe (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFY
Description: Part of ENCODE experiment ENCSR000AFY. The libraries contained in this experiment come from human fetal parietal lobe tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_52_+ 1–52 1929.00 22.29 8.20 96.64 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_55_+ 1–55 273.00 3.15 1.16 25.07 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_41_+ 1–41 387.00 4.47 1.64 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHR16-3158922 tRNA-transcript-chr16-3158922_3_32_+ 3–32 59.00 4.30 0.25 25.32 TRNA-TRANSCRIPT-CHR16-3158922 Pro tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHR16-3158922 tRNA-transcript-chr16-3158922_31_53_+ 31–53 72.00 5.24 0.31 100.0 TRNA-TRANSCRIPT-CHR16-3158922 Pro tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHR16-3172048 tRNA-transcript-chr16-3172048_32_53_+ 32–53 41.00 3.07 0.17 100.0 TRNA-TRANSCRIPT-CHR16-3172048 Pro tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_13_25_+ 13–25 78.00 1.18 0.33 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_47_73_+ 47–73 7.00 0.11 0.03 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_1_13_+ 1–13 103.00 1.56 0.44 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_1_34_+ 1–34 3045.00 46.10 12.94 89.19 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_1_41_+ 1–41 1464.00 22.17 6.22 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHR16-3182635 tRNA-transcript-chr16-3182635_31_53_+ 31–53 30.00 2.80 0.13 100.0 TRNA-TRANSCRIPT-CHR16-3182635 Pro tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHR16-3191501 tRNA-transcript-chr16-3191501_1_33_+ 1–33 3170.00 56.50 13.47 83.11 TRNA-TRANSCRIPT-CHR16-3191501 Lys tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHR16-3191989 tRNA-transcript-chr16-3191989_31_53_+ 31–53 4.00 0.43 0.02 100.0 TRNA-TRANSCRIPT-CHR16-3191989 Pro tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_1_52_+ 1–52 350.00 26.26 1.49 100.0 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_1_35_+ 1–35 123.00 9.23 0.52 100.0 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_1_32_+ 1–32 46.00 3.45 0.20 100.0 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_33_71_+ 33–71 2.00 0.15 0.01 25.0 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHR16-70789507 tRNA-transcript-chr16-70789507_1_48_+ 1–48 342.00 0.45 1.45 100.0 TRNA-TRANSCRIPT-CHR16-70789507 Gly tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHR17-19860862 tRNA-transcript-chr17-19860862_1_32_+ 1–32 96.00 28.32 0.41 100.0 TRNA-TRANSCRIPT-CHR17-19860862 Gly tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHR17-39154491 tRNA-transcript-chr17-39154491_1_34_+ 1–34 94.00 31.23 0.40 69.12 TRNA-TRANSCRIPT-CHR17-39154491 Cys tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHR17-39154491 tRNA-transcript-chr17-39154491_1_13_+ 1–13 8.00 2.66 0.03 100.0 TRNA-TRANSCRIPT-CHR17-39154491 Cys tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHR17-39154491 tRNA-transcript-chr17-39154491_1_32_+ 1–32 42.00 13.95 0.18 30.88 TRNA-TRANSCRIPT-CHR17-39154491 Cys tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHR17-49192528 tRNA-transcript-chr17-49192528_1_53_+ 1–53 925.00 48.68 3.93 100.0 TRNA-TRANSCRIPT-CHR17-49192528 Gln tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHR17-49192528 tRNA-transcript-chr17-49192528_32_53_+ 32–53 19.00 1.00 0.08 100.0 TRNA-TRANSCRIPT-CHR17-49192528 Gln tRNA parietal lobe (Tissue)