ENCFF001RMG

Library Details

Organism: Homo Sapiens
Biosample: parietal lobe (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFY
Description: Part of ENCODE experiment ENCSR000AFY. The libraries contained in this experiment come from human fetal parietal lobe tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000668048.2 ENST00000668048.2_565_594_+ 565–594 54.00 0.00 0.23 100.0 SNHG1-248 lncRNA parietal lobe (Tissue)
ENST00000668048.2 ENST00000668048.2_1949_1982_+ 1949–1982 1384.00 0.10 5.88 57.98 SNHG1-248 lncRNA parietal lobe (Tissue)
ENST00000668048.2 ENST00000668048.2_2160_2223_+ 2160–2223 970.00 0.07 4.12 100.0 SNHG1-248 lncRNA parietal lobe (Tissue)
ENST00000668048.2 ENST00000668048.2_1921_1978_+ 1921–1978 869.00 0.06 3.69 100.0 SNHG1-248 lncRNA parietal lobe (Tissue)
ENST00000668048.2 ENST00000668048.2_1194_1265_+ 1194–1265 2538.00 0.18 10.79 100.0 SNHG1-248 lncRNA parietal lobe (Tissue)
ENST00000668419.1 ENST00000668419.1_3471_3561_+ 3471–3561 141526.00 35.60 601.54 100.0 SNHG14-315 lncRNA parietal lobe (Tissue)
ENST00000668419.1 ENST00000668419.1_1471_1561_+ 1471–1561 90040.00 22.65 382.71 90.93 SNHG14-315 lncRNA parietal lobe (Tissue)
ENST00000668419.1 ENST00000668419.1_2_92_+ 2–92 120696.00 30.36 513.01 89.13 SNHG14-315 lncRNA parietal lobe (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1322_+ 1278–1322 2226.00 0.73 9.46 100.0 SNHG5-273 lncRNA parietal lobe (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1351_+ 1278–1351 97850.37 31.95 415.90 40.1 SNHG5-273 lncRNA parietal lobe (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1337_+ 1278–1337 226.00 0.07 0.96 100.0 SNHG5-273 lncRNA parietal lobe (Tissue)
ENST00000668505.1 ENST00000668505.1_988_1033_+ 988–1033 253.00 0.08 1.08 100.0 SNHG5-273 lncRNA parietal lobe (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1353_+ 1278–1353 173343.40 56.60 736.78 63.19 SNHG5-273 lncRNA parietal lobe (Tissue)
ENST00000668505.1 ENST00000668505.1_988_1056_+ 988–1056 7682.00 2.51 32.65 84.69 SNHG5-273 lncRNA parietal lobe (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1315_+ 1278–1315 96.00 0.03 0.41 100.0 SNHG5-273 lncRNA parietal lobe (Tissue)
ENST00000668505.1 ENST00000668505.1_1279_1308_+ 1279–1308 1095.00 0.36 4.65 100.0 SNHG5-273 lncRNA parietal lobe (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1340_+ 1278–1340 690.00 0.23 2.93 100.0 SNHG5-273 lncRNA parietal lobe (Tissue)
ENST00000668505.1 ENST00000668505.1_1272_1352_+ 1272–1352 1.00 0.00 0.00 100.0 SNHG5-273 lncRNA parietal lobe (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1361_+ 1278–1361 4955.00 1.62 21.06 98.69 SNHG5-273 lncRNA parietal lobe (Tissue)
ENST00000669673.1 ENST00000669673.1_3794_3884_+ 3794–3884 2227.00 4.19 9.47 75.44 SNHG14-323 lncRNA parietal lobe (Tissue)
ENST00000670680.1 ENST00000670680.1_36_69_+ 36–69 125.00 0.09 0.53 48.45 MEG8-251 lncRNA parietal lobe (Tissue)
ENST00000670680.1 ENST00000670680.1_34_69_+ 34–69 175.00 0.12 0.74 70.85 MEG8-251 lncRNA parietal lobe (Tissue)
ENST00000670680.1 ENST00000670680.1_2_69_+ 2–69 129918.00 91.47 552.20 96.17 MEG8-251 lncRNA parietal lobe (Tissue)
ENST00000670680.1 ENST00000670680.1_1539_1602_+ 1539–1602 977.00 0.69 4.15 68.27 MEG8-251 lncRNA parietal lobe (Tissue)
ENST00000670680.1 ENST00000670680.1_10_70_+ 10–70 384.00 0.27 1.63 100.0 MEG8-251 lncRNA parietal lobe (Tissue)