ENCFF001RMG

Library Details

Organism: Homo Sapiens
Biosample: parietal lobe (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFY
Description: Part of ENCODE experiment ENCSR000AFY. The libraries contained in this experiment come from human fetal parietal lobe tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000668048.2 ENST00000668048.2_523_581_+ 523–581 260.50 0.02 1.11 40.83 SNHG1-248 lncRNA parietal lobe (Tissue)
ENST00000668048.2 ENST00000668048.2_1946_1982_+ 1946–1982 1803.00 0.13 7.66 88.77 SNHG1-248 lncRNA parietal lobe (Tissue)
ENST00000668048.2 ENST00000668048.2_1921_1982_+ 1921–1982 678586.00 48.96 2884.27 98.46 SNHG1-248 lncRNA parietal lobe (Tissue)
ENST00000668048.2 ENST00000668048.2_2522_2560_+ 2522–2560 604.00 0.04 2.57 62.27 SNHG1-248 lncRNA parietal lobe (Tissue)
ENST00000668048.2 ENST00000668048.2_2157_2223_+ 2157–2223 73998.00 5.34 314.52 99.38 SNHG1-248 lncRNA parietal lobe (Tissue)
ENST00000668048.2 ENST00000668048.2_2532_2560_+ 2532–2560 6280.00 0.45 26.69 100.0 SNHG1-248 lncRNA parietal lobe (Tissue)
ENST00000668048.2 ENST00000668048.2_2496_2560_+ 2496–2560 52561.00 3.79 223.41 97.94 SNHG1-248 lncRNA parietal lobe (Tissue)
ENST00000668048.2 ENST00000668048.2_523_570_+ 523–570 124.00 0.01 0.53 100.0 SNHG1-248 lncRNA parietal lobe (Tissue)
ENST00000668048.2 ENST00000668048.2_847_874_+ 847–874 1013.00 0.07 4.31 100.0 SNHG1-248 lncRNA parietal lobe (Tissue)
ENST00000668048.2 ENST00000668048.2_523_549_+ 523–549 1485.00 0.11 6.31 100.0 SNHG1-248 lncRNA parietal lobe (Tissue)
ENST00000668048.2 ENST00000668048.2_1194_1268_+ 1194–1268 3874.00 0.28 16.47 100.0 SNHG1-248 lncRNA parietal lobe (Tissue)
ENST00000668048.2 ENST00000668048.2_523_584_+ 523–584 180.00 0.01 0.77 100.0 SNHG1-248 lncRNA parietal lobe (Tissue)
ENST00000668048.2 ENST00000668048.2_287_322_+ 287–322 178.00 0.01 0.76 100.0 SNHG1-248 lncRNA parietal lobe (Tissue)
ENST00000668048.2 ENST00000668048.2_2157_2173_+ 2157–2173 1301.00 0.09 5.53 100.0 SNHG1-248 lncRNA parietal lobe (Tissue)
ENST00000668048.2 ENST00000668048.2_258_296_+ 258–296 443.00 0.03 1.88 100.0 SNHG1-248 lncRNA parietal lobe (Tissue)
ENST00000668048.2 ENST00000668048.2_2184_2223_+ 2184–2223 1438.00 0.10 6.11 100.0 SNHG1-248 lncRNA parietal lobe (Tissue)
ENST00000668048.2 ENST00000668048.2_258_324_+ 258–324 116194.00 8.38 493.87 73.0 SNHG1-248 lncRNA parietal lobe (Tissue)
ENST00000668048.2 ENST00000668048.2_2507_2560_+ 2507–2560 810.00 0.06 3.44 100.0 SNHG1-248 lncRNA parietal lobe (Tissue)
ENST00000668048.2 ENST00000668048.2_524_594_+ 524–594 196396.00 14.17 834.76 96.13 SNHG1-248 lncRNA parietal lobe (Tissue)
ENST00000668048.2 ENST00000668048.2_2514_2560_+ 2514–2560 1421.00 0.10 6.04 100.0 SNHG1-248 lncRNA parietal lobe (Tissue)
ENST00000668048.2 ENST00000668048.2_1936_1982_+ 1936–1982 431.00 0.03 1.83 100.0 SNHG1-248 lncRNA parietal lobe (Tissue)
ENST00000668048.2 ENST00000668048.2_517_596_+ 517–596 1.00 0.00 0.00 100.0 SNHG1-248 lncRNA parietal lobe (Tissue)
ENST00000668048.2 ENST00000668048.2_806_874_+ 806–874 100930.00 7.28 428.99 100.0 SNHG1-248 lncRNA parietal lobe (Tissue)
ENST00000668048.2 ENST00000668048.2_1953_1982_+ 1953–1982 1217.00 0.09 5.17 69.31 SNHG1-248 lncRNA parietal lobe (Tissue)
ENST00000668048.2 ENST00000668048.2_523_579_+ 523–579 351.09 0.03 1.49 55.03 SNHG1-248 lncRNA parietal lobe (Tissue)