ENCFF001RMG

Library Details

Organism: Homo Sapiens
Biosample: parietal lobe (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFY
Description: Part of ENCODE experiment ENCSR000AFY. The libraries contained in this experiment come from human fetal parietal lobe tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000650796.1 ENST00000650796.1_2631_2673_+ 2631–2673 1409.00 0.20 5.99 100.0 GAS5-230 retained intron parietal lobe (Tissue)
ENST00000650796.1 ENST00000650796.1_1049_1079_+ 1049–1079 705.00 0.10 3.00 100.0 GAS5-230 retained intron parietal lobe (Tissue)
ENST00000650796.1 ENST00000650796.1_157_198_+ 157–198 322.00 0.05 1.37 100.0 GAS5-230 retained intron parietal lobe (Tissue)
ENST00000650796.1 ENST00000650796.1_160_197_+ 160–197 265.00 0.04 1.13 100.0 GAS5-230 retained intron parietal lobe (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1086_+ 1048–1086 471.00 0.07 2.00 100.0 GAS5-230 retained intron parietal lobe (Tissue)
ENST00000650796.1 ENST00000650796.1_2890_2925_+ 2890–2925 4691.00 0.67 19.94 83.63 GAS5-230 retained intron parietal lobe (Tissue)
ENST00000650796.1 ENST00000650796.1_2898_2925_+ 2898–2925 23182.00 3.29 98.53 100.0 GAS5-230 retained intron parietal lobe (Tissue)
ENST00000650796.1 ENST00000650796.1_363_440_+ 363–440 17835.00 2.53 75.81 100.0 GAS5-230 retained intron parietal lobe (Tissue)
ENST00000650796.1 ENST00000650796.1_2631_2707_+ 2631–2707 41580.00 5.90 176.73 98.23 GAS5-230 retained intron parietal lobe (Tissue)
ENST00000650796.1 ENST00000650796.1_2172_2243_+ 2172–2243 142957.00 20.29 607.63 100.0 GAS5-230 retained intron parietal lobe (Tissue)
ENST00000650796.1 ENST00000650796.1_1391_1452_+ 1391–1452 3296.00 0.47 14.01 100.0 GAS5-230 retained intron parietal lobe (Tissue)
ENST00000650796.1 ENST00000650796.1_2858_2925_+ 2858–2925 19558.00 2.78 83.13 100.0 GAS5-230 retained intron parietal lobe (Tissue)
ENST00000650796.1 ENST00000650796.1_1641_1722_+ 1641–1722 1.00 0.00 0.00 100.0 GAS5-230 retained intron parietal lobe (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1118_+ 1048–1118 133.00 0.02 0.57 100.0 GAS5-230 retained intron parietal lobe (Tissue)
ENST00000651140.1 ENST00000651140.1_696_716_+ 696–716 487.00 8.10 2.07 100.0 FTX-219 lncRNA parietal lobe (Tissue)
ENST00000651140.1 ENST00000651140.1_890_912_+ 890–912 3184.00 52.93 13.53 82.02 FTX-219 lncRNA parietal lobe (Tissue)
ENST00000651323.1 ENST00000651323.1_5199_5247_+ 5199–5247 314.00 3.57 1.33 45.44 CTC1-214 protein coding parietal lobe (Tissue)
ENST00000651323.1 ENST00000651323.1_5233_5247_+ 5233–5247 1235.00 14.05 5.25 78.66 CTC1-214 protein coding parietal lobe (Tissue)
ENST00000651323.1 ENST00000651323.1_5163_5174_+ 5163–5174 781.00 8.89 3.32 26.94 CTC1-214 protein coding parietal lobe (Tissue)
ENST00000651323.1 ENST00000651323.1_5201_5247_+ 5201–5247 377.00 4.29 1.60 54.56 CTC1-214 protein coding parietal lobe (Tissue)
ENST00000651323.1 ENST00000651323.1_5163_5177_+ 5163–5177 2815.00 32.03 11.96 94.53 CTC1-214 protein coding parietal lobe (Tissue)
ENST00000651323.1 ENST00000651323.1_5214_5247_+ 5214–5247 42.00 0.48 0.18 100.0 CTC1-214 protein coding parietal lobe (Tissue)
ENST00000651323.1 ENST00000651323.1_5163_5185_+ 5163–5185 510.00 5.80 2.17 100.0 CTC1-214 protein coding parietal lobe (Tissue)
ENST00000651323.1 ENST00000651323.1_5230_5247_+ 5230–5247 878.00 9.99 3.73 100.0 CTC1-214 protein coding parietal lobe (Tissue)
ENST00000651540.1 ENST00000651540.1_6_45_+ 6–45 2221.00 7.28 9.44 81.99 ENST00000651540 lncRNA parietal lobe (Tissue)