ENCFF001RMG

Library Details

Organism: Homo Sapiens
Biosample: parietal lobe (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFY
Description: Part of ENCODE experiment ENCSR000AFY. The libraries contained in this experiment come from human fetal parietal lobe tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000485101.5 ENST00000485101.5_343_418_+ 343–418 1987.00 0.24 8.45 100.0 EIF4A2-219 retained intron parietal lobe (Tissue)
ENST00000485101.5 ENST00000485101.5_365_408_+ 365–408 1158.00 0.14 4.92 57.24 EIF4A2-219 retained intron parietal lobe (Tissue)
ENST00000485101.5 ENST00000485101.5_343_400_+ 343–400 1859.00 0.23 7.90 42.04 EIF4A2-219 retained intron parietal lobe (Tissue)
ENST00000485101.5 ENST00000485101.5_362_405_+ 362–405 1143.00 0.14 4.86 63.5 EIF4A2-219 retained intron parietal lobe (Tissue)
ENST00000485390.5 ENST00000485390.5_230_303_+ 230–303 8535.00 95.96 36.28 100.0 RPS8-207 protein coding CDS not defined parietal lobe (Tissue)
ENST00000485706.5 ENST00000485706.5_456_485_+ 456–485 115.00 3.31 0.49 100.0 RPL7A-206 protein coding CDS not defined parietal lobe (Tissue)
ENST00000485706.5 ENST00000485706.5_486_524_+ 486–524 287.00 8.26 1.22 100.0 RPL7A-206 protein coding CDS not defined parietal lobe (Tissue)
ENST00000485706.5 ENST00000485706.5_456_524_+ 456–524 1730.00 49.78 7.35 100.0 RPL7A-206 protein coding CDS not defined parietal lobe (Tissue)
ENST00000485756.1 ENST00000485756.1_122_192_+ 122–192 142186.00 14.58 604.35 99.48 RPL21-209 retained intron parietal lobe (Tissue)
ENST00000485756.1 ENST00000485756.1_173_189_+ 173–189 833.00 0.09 3.54 100.0 RPL21-209 retained intron parietal lobe (Tissue)
ENST00000485756.1 ENST00000485756.1_123_168_+ 123–168 2353.00 0.24 10.00 100.0 RPL21-209 retained intron parietal lobe (Tissue)
ENST00000485756.1 ENST00000485756.1_138_189_+ 138–189 3592.00 0.37 15.27 100.0 RPL21-209 retained intron parietal lobe (Tissue)
ENST00000485756.1 ENST00000485756.1_123_189_+ 123–189 817345.00 83.79 3474.05 99.25 RPL21-209 retained intron parietal lobe (Tissue)
ENST00000486255.1 ENST00000486255.1_1073_1096_+ 1073–1096 10.00 15.87 0.04 100.0 GABRE-209 retained intron parietal lobe (Tissue)
ENST00000488946.1 ENST00000488946.1_148_235_+ 148–235 5.00 0.00 0.02 100.0 RPL13A-212 retained intron parietal lobe (Tissue)
ENST00000488946.1 ENST00000488946.1_844_886_+ 844–886 7.00 0.00 0.03 100.0 RPL13A-212 retained intron parietal lobe (Tissue)
ENST00000488946.1 ENST00000488946.1_804_886_+ 804–886 10387.00 5.40 44.15 83.11 RPL13A-212 retained intron parietal lobe (Tissue)
ENST00000488946.1 ENST00000488946.1_197_235_+ 197–235 144.00 0.07 0.61 100.0 RPL13A-212 retained intron parietal lobe (Tissue)
ENST00000488946.1 ENST00000488946.1_1363_1444_+ 1363–1444 3907.00 2.03 16.61 100.0 RPL13A-212 retained intron parietal lobe (Tissue)
ENST00000488946.1 ENST00000488946.1_1095_1159_+ 1095–1159 757.00 0.39 3.22 100.0 RPL13A-212 retained intron parietal lobe (Tissue)
ENST00000488946.1 ENST00000488946.1_1364_1441_+ 1364–1441 540.00 0.28 2.30 51.43 RPL13A-212 retained intron parietal lobe (Tissue)
ENST00000488946.1 ENST00000488946.1_155_235_+ 155–235 157556.00 81.95 669.68 97.47 RPL13A-212 retained intron parietal lobe (Tissue)
ENST00000489392.1 ENST00000489392.1_116_191_+ 116–191 12505.00 55.22 53.15 68.97 RPL7A-207 protein coding CDS not defined parietal lobe (Tissue)
ENST00000489392.1 ENST00000489392.1_151_191_+ 151–191 470.00 2.08 2.00 100.0 RPL7A-207 protein coding CDS not defined parietal lobe (Tissue)
ENST00000489392.1 ENST00000489392.1_151_188_+ 151–188 287.00 1.27 1.22 100.0 RPL7A-207 protein coding CDS not defined parietal lobe (Tissue)