ENCFF001RMF

Library Details

Organism: Homo Sapiens
Biosample: metanephros (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFU
Description: Part of ENCODE experiment ENCSR000AFU. The libraries contained in this experiment come from human fetal kidney tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR16-3191501 tRNA-transcript-chr16-3191501_1_33_+ 1–33 2294.00 46.86 4.27 68.11 TRNA-TRANSCRIPT-CHR16-3191501 Lys tRNA metanephros (Tissue)
TRNA-TRANSCRIPT-CHR16-3191989 tRNA-transcript-chr16-3191989_31_53_+ 31–53 27.00 2.69 0.05 100.0 TRNA-TRANSCRIPT-CHR16-3191989 Pro tRNA metanephros (Tissue)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_1_52_+ 1–52 108.00 12.89 0.20 100.0 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA metanephros (Tissue)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_1_35_+ 1–35 96.00 11.46 0.18 100.0 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA metanephros (Tissue)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_1_32_+ 1–32 203.00 24.22 0.38 100.0 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA metanephros (Tissue)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_33_71_+ 33–71 13.00 1.55 0.02 81.25 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA metanephros (Tissue)
TRNA-TRANSCRIPT-CHR16-70789507 tRNA-transcript-chr16-70789507_1_48_+ 1–48 109.00 0.05 0.20 100.0 TRNA-TRANSCRIPT-CHR16-70789507 Gly tRNA metanephros (Tissue)
TRNA-TRANSCRIPT-CHR17-19860862 tRNA-transcript-chr17-19860862_1_32_+ 1–32 148.00 36.63 0.28 100.0 TRNA-TRANSCRIPT-CHR17-19860862 Gly tRNA metanephros (Tissue)
TRNA-TRANSCRIPT-CHR17-39154491 tRNA-transcript-chr17-39154491_1_34_+ 1–34 145.00 23.42 0.27 47.23 TRNA-TRANSCRIPT-CHR17-39154491 Cys tRNA metanephros (Tissue)
TRNA-TRANSCRIPT-CHR17-39154491 tRNA-transcript-chr17-39154491_1_13_+ 1–13 134.00 21.65 0.25 100.0 TRNA-TRANSCRIPT-CHR17-39154491 Cys tRNA metanephros (Tissue)
TRNA-TRANSCRIPT-CHR17-39154491 tRNA-transcript-chr17-39154491_1_32_+ 1–32 162.00 26.17 0.30 52.77 TRNA-TRANSCRIPT-CHR17-39154491 Cys tRNA metanephros (Tissue)
TRNA-TRANSCRIPT-CHR17-49192528 tRNA-transcript-chr17-49192528_1_53_+ 1–53 208.00 24.88 0.39 100.0 TRNA-TRANSCRIPT-CHR17-49192528 Gln tRNA metanephros (Tissue)
TRNA-TRANSCRIPT-CHR17-49192528 tRNA-transcript-chr17-49192528_32_53_+ 32–53 2.00 0.24 0.00 100.0 TRNA-TRANSCRIPT-CHR17-49192528 Gln tRNA metanephros (Tissue)
TRNA-TRANSCRIPT-CHR17-68019897 tRNA-transcript-chr17-68019897_1_33_+ 1–33 174.00 42.13 0.32 100.0 TRNA-TRANSCRIPT-CHR17-68019897 Arg tRNA metanephros (Tissue)
TRNA-TRANSCRIPT-CHR17-75033906 tRNA-transcript-chr17-75033906_12_29_+ 12–29 486.00 84.52 0.90 100.0 TRNA-TRANSCRIPT-CHR17-75033906 Arg tRNA metanephros (Tissue)
TRNA-TRANSCRIPT-CHR17-75035113 tRNA-transcript-chr17-75035113_1_33_+ 1–33 81.00 34.32 0.15 100.0 TRNA-TRANSCRIPT-CHR17-75035113 Arg tRNA metanephros (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_8_53_+ 8–53 5.00 0.12 0.01 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA metanephros (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_21_72_+ 21–72 2.00 0.05 0.00 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA metanephros (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_17_54_+ 17–54 29.00 0.67 0.05 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA metanephros (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_1_34_+ 1–34 14.00 0.32 0.03 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA metanephros (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_1_49_+ 1–49 99.00 2.28 0.18 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA metanephros (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_34_53_+ 34–53 13.00 0.30 0.02 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA metanephros (Tissue)
TRNA-TRANSCRIPT-CHR17-8125746 tRNA-transcript-chr17-8125746_1_52_+ 1–52 2949.00 1.41 5.49 93.47 TRNA-TRANSCRIPT-CHR17-8125746 Gly tRNA metanephros (Tissue)
TRNA-TRANSCRIPT-CHR17-8125746 tRNA-transcript-chr17-8125746_13_32_+ 13–32 211.00 0.10 0.39 67.85 TRNA-TRANSCRIPT-CHR17-8125746 Gly tRNA metanephros (Tissue)
TRNA-TRANSCRIPT-CHR17-8125746 tRNA-transcript-chr17-8125746_10_32_+ 10–32 96.00 0.05 0.18 51.06 TRNA-TRANSCRIPT-CHR17-8125746 Gly tRNA metanephros (Tissue)