ENCFF001RMF

Library Details

Organism: Homo Sapiens
Biosample: metanephros (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFU
Description: Part of ENCODE experiment ENCSR000AFU. The libraries contained in this experiment come from human fetal kidney tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR1-167715488 tRNA-transcript-chr1-167715488_8_31_+ 8–31 9.00 0.70 0.02 100.0 TRNA-TRANSCRIPT-CHR1-167715488 Pro tRNA metanephros (Tissue)
TRNA-TRANSCRIPT-CHR1-16861921 tRNA-transcript-chr1-16861921_1_35_+ 1–35 33.00 0.02 0.06 7.07 TRNA-TRANSCRIPT-CHR1-16861921 Gly tRNA metanephros (Tissue)
TRNA-TRANSCRIPT-CHR1-16861921 tRNA-transcript-chr1-16861921_18_53_+ 18–53 39.00 0.02 0.07 100.0 TRNA-TRANSCRIPT-CHR1-16861921 Gly tRNA metanephros (Tissue)
TRNA-TRANSCRIPT-CHR11-76235825 tRNA-transcript-chr11-76235825_1_32_+ 1–32 80.00 13.58 0.15 90.91 TRNA-TRANSCRIPT-CHR11-76235825 Pro tRNA metanephros (Tissue)
TRNA-TRANSCRIPT-CHR11-76235825 tRNA-transcript-chr11-76235825_3_32_+ 3–32 21.00 3.57 0.04 20.79 TRNA-TRANSCRIPT-CHR11-76235825 Pro tRNA metanephros (Tissue)
TRNA-TRANSCRIPT-CHR12-124939966 tRNA-transcript-chr12-124939966_1_53_+ 1–53 140.00 20.56 0.26 100.0 TRNA-TRANSCRIPT-CHR12-124939966 Ala tRNA metanephros (Tissue)
TRNA-TRANSCRIPT-CHR1-248874248 tRNA-transcript-chr1-248874248_1_39_+ 1–39 318.00 0.59 0.59 100.0 TRNA-TRANSCRIPT-CHR1-248874248 Glu tRNA metanephros (Tissue)
TRNA-TRANSCRIPT-CHR1-248874248 tRNA-transcript-chr1-248874248_1_33_+ 1–33 33846.00 62.94 62.97 93.25 TRNA-TRANSCRIPT-CHR1-248874248 Glu tRNA metanephros (Tissue)
TRNA-TRANSCRIPT-CHR12-98503503 tRNA-transcript-chr12-98503503_1_33_+ 1–33 6.00 3.09 0.01 100.0 TRNA-TRANSCRIPT-CHR12-98503503 Asp tRNA metanephros (Tissue)
TRNA-TRANSCRIPT-CHR1-54957869 tRNA-transcript-chr1-54957869_16_32_+ 16–32 16.00 2.13 0.03 100.0 TRNA-TRANSCRIPT-CHR1-54957869 Lys tRNA metanephros (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_16_32_+ 16–32 34.00 0.42 0.06 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA metanephros (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_55_+ 1–55 48.00 0.59 0.09 38.1 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA metanephros (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_41_+ 1–41 127.00 1.57 0.24 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA metanephros (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_4_33_+ 4–33 18.00 0.22 0.03 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA metanephros (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_52_+ 1–52 387.00 4.78 0.72 97.73 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA metanephros (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_29_+ 1–29 14.00 0.17 0.03 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA metanephros (Tissue)
TRNA-TRANSCRIPT-CHR16-3158922 tRNA-transcript-chr16-3158922_31_53_+ 31–53 228.00 16.07 0.42 100.0 TRNA-TRANSCRIPT-CHR16-3158922 Pro tRNA metanephros (Tissue)
TRNA-TRANSCRIPT-CHR16-3158922 tRNA-transcript-chr16-3158922_3_32_+ 3–32 124.00 8.74 0.23 36.9 TRNA-TRANSCRIPT-CHR16-3158922 Pro tRNA metanephros (Tissue)
TRNA-TRANSCRIPT-CHR16-3172048 tRNA-transcript-chr16-3172048_32_53_+ 32–53 179.00 13.33 0.33 100.0 TRNA-TRANSCRIPT-CHR16-3172048 Pro tRNA metanephros (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_1_13_+ 1–13 504.00 3.35 0.94 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA metanephros (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_1_34_+ 1–34 11323.00 75.18 21.07 90.28 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA metanephros (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_1_41_+ 1–41 290.00 1.93 0.54 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA metanephros (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_13_25_+ 13–25 6.00 0.04 0.01 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA metanephros (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_47_73_+ 47–73 1.00 0.01 0.00 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA metanephros (Tissue)
TRNA-TRANSCRIPT-CHR16-3182635 tRNA-transcript-chr16-3182635_31_53_+ 31–53 171.00 13.27 0.32 100.0 TRNA-TRANSCRIPT-CHR16-3182635 Pro tRNA metanephros (Tissue)