ENCFF001RMF

Library Details

Organism: Homo Sapiens
Biosample: metanephros (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFU
Description: Part of ENCODE experiment ENCSR000AFU. The libraries contained in this experiment come from human fetal kidney tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR1-121016845 tRNA-transcript-chr1-121016845_2_52_+ 2–52 4.00 0.05 0.01 100.0 TRNA-TRANSCRIPT-CHR1-121016845 Gly tRNA metanephros (Tissue)
TRNA-TRANSCRIPT-CHR1-121020729 tRNA-transcript-chr1-121020729_1_54_+ 1–54 382.00 0.29 0.71 100.0 TRNA-TRANSCRIPT-CHR1-121020729 Val tRNA metanephros (Tissue)
TRNA-TRANSCRIPT-CHR1-145157157 tRNA-transcript-chr1-145157157_1_33_+ 1–33 58.00 7.73 0.11 100.0 TRNA-TRANSCRIPT-CHR1-145157157 Val tRNA metanephros (Tissue)
TRNA-TRANSCRIPT-CHR1-145157157 tRNA-transcript-chr1-145157157_1_23_+ 1–23 479.00 63.87 0.89 100.0 TRNA-TRANSCRIPT-CHR1-145157157 Val tRNA metanephros (Tissue)
TRNA-TRANSCRIPT-CHR1-146037061 tRNA-transcript-chr1-146037061_1_53_+ 1–53 27.00 6.96 0.05 100.0 TRNA-TRANSCRIPT-CHR1-146037061 Gly tRNA metanephros (Tissue)
TRNA-TRANSCRIPT-CHR1-148032790 tRNA-transcript-chr1-148032790_1_53_+ 1–53 8.00 0.83 0.01 100.0 TRNA-TRANSCRIPT-CHR1-148032790 Gln tRNA metanephros (Tissue)
TRNA-TRANSCRIPT-CHR1-149692805 tRNA-transcript-chr1-149692805_4_33_+ 4–33 194.00 44.29 0.36 81.86 TRNA-TRANSCRIPT-CHR1-149692805 Pseudo tRNA metanephros (Tissue)
TRNA-TRANSCRIPT-CHR1-149712552 tRNA-transcript-chr1-149712552_1_39_+ 1–39 36.00 0.03 0.07 100.0 TRNA-TRANSCRIPT-CHR1-149712552 Val tRNA metanephros (Tissue)
TRNA-TRANSCRIPT-CHR1-159141611 tRNA-transcript-chr1-159141611_3_20_+ 3–20 2.00 22.22 0.00 100.0 TRNA-TRANSCRIPT-CHR1-159141611 Arg tRNA metanephros (Tissue)
TRNA-TRANSCRIPT-CHR1-161440825 tRNA-transcript-chr1-161440825_4_34_+ 4–34 87.00 9.59 0.16 97.75 TRNA-TRANSCRIPT-CHR1-161440825 Asp tRNA metanephros (Tissue)
TRNA-TRANSCRIPT-CHR1-161440825 tRNA-transcript-chr1-161440825_32_53_+ 32–53 50.00 5.51 0.09 100.0 TRNA-TRANSCRIPT-CHR1-161440825 Asp tRNA metanephros (Tissue)
TRNA-TRANSCRIPT-CHR1-161440825 tRNA-transcript-chr1-161440825_40_71_+ 40–71 61.00 6.73 0.11 100.0 TRNA-TRANSCRIPT-CHR1-161440825 Asp tRNA metanephros (Tissue)
TRNA-TRANSCRIPT-CHR1-161448951 tRNA-transcript-chr1-161448951_1_26_+ 1–26 337.00 28.85 0.63 100.0 TRNA-TRANSCRIPT-CHR1-161448951 Leu tRNA metanephros (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_21_49_+ 21–49 13.00 0.02 0.02 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA metanephros (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_1_53_+ 1–53 484.00 0.89 0.90 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA metanephros (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_14_49_+ 14–49 487.00 0.89 0.91 87.43 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA metanephros (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_21_34_+ 21–34 25.00 0.05 0.05 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA metanephros (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_16_42_+ 16–42 149.00 0.27 0.28 78.84 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA metanephros (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_4_33_+ 4–33 10514.00 19.26 19.56 49.78 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA metanephros (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_1_72_+ 1–72 128.00 0.23 0.24 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA metanephros (Tissue)
TRNA-TRANSCRIPT-CHR1-161480566 tRNA-transcript-chr1-161480566_1_32_+ 1–32 33.00 50.77 0.06 100.0 TRNA-TRANSCRIPT-CHR1-161480566 Gly tRNA metanephros (Tissue)
TRNA-TRANSCRIPT-CHR1-16545939 tRNA-transcript-chr1-16545939_1_52_+ 1–52 29.00 0.02 0.05 93.55 TRNA-TRANSCRIPT-CHR1-16545939 Gly tRNA metanephros (Tissue)
TRNA-TRANSCRIPT-CHR1-16678271 tRNA-transcript-chr1-16678271_1_32_+ 1–32 84.00 11.14 0.16 100.0 TRNA-TRANSCRIPT-CHR1-16678271 Gly tRNA metanephros (Tissue)
TRNA-TRANSCRIPT-CHR1-16678271 tRNA-transcript-chr1-16678271_14_32_+ 14–32 112.00 14.85 0.21 100.0 TRNA-TRANSCRIPT-CHR1-16678271 Gly tRNA metanephros (Tissue)
TRNA-TRANSCRIPT-CHR1-16727285 tRNA-transcript-chr1-16727285_2_32_+ 2–32 364.00 32.91 0.68 100.0 TRNA-TRANSCRIPT-CHR1-16727285 Gly tRNA metanephros (Tissue)