ENCFF001RMF

Library Details

Organism: Homo Sapiens
Biosample: metanephros (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFU
Description: Part of ENCODE experiment ENCSR000AFU. The libraries contained in this experiment come from human fetal kidney tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000776279.1 ENST00000776279.1_172_234_+ 172–234 664.87 0.04 1.24 54.01 SNHG25-206 lncRNA metanephros (Tissue)
ENST00000776279.1 ENST00000776279.1_174_234_+ 174–234 553.88 0.03 1.03 31.85 SNHG25-206 lncRNA metanephros (Tissue)
ENST00000776279.1 ENST00000776279.1_196_234_+ 196–234 4423.00 0.25 8.23 79.49 SNHG25-206 lncRNA metanephros (Tissue)
ENST00000776279.1 ENST00000776279.1_184_234_+ 184–234 689.00 0.04 1.28 100.0 SNHG25-206 lncRNA metanephros (Tissue)
ENST00000778783.1 ENST00000778783.1_84_171_+ 84–171 1193.00 80.94 2.22 100.0 ENST00000778783 lncRNA metanephros (Tissue)
ENST00000779378.1 ENST00000779378.1_905_928_+ 905–928 1789.00 81.43 3.33 84.67 MIR155HG-205 lncRNA metanephros (Tissue)
ENST00000784740.1 ENST00000784740.1_245_265_+ 245–265 2.00 22.22 0.00 100.0 ENST00000784740 lncRNA metanephros (Tissue)
ENST00000785178.1 ENST00000785178.1_899_938_+ 899–938 101.00 5.12 0.19 100.0 ENST00000785178 lncRNA metanephros (Tissue)
ENST00000786284.1 ENST00000786284.1_38_80_+ 38–80 88.00 10.60 0.16 79.28 ENST00000786284 lncRNA metanephros (Tissue)
ENST00000786284.1 ENST00000786284.1_46_80_+ 46–80 203.00 24.46 0.38 100.0 ENST00000786284 lncRNA metanephros (Tissue)
ENST00000786284.1 ENST00000786284.1_40_80_+ 40–80 23.00 2.77 0.04 31.51 ENST00000786284 lncRNA metanephros (Tissue)
ENST00000788343.1 ENST00000788343.1_17_107_+ 17–107 525.00 54.63 0.98 73.02 ENST00000788343 lncRNA metanephros (Tissue)
ENST00000797550.1 ENST00000797550.1_7_63_+ 7–63 12129.44 35.07 22.57 49.18 ENST00000797550 lncRNA metanephros (Tissue)
ENST00000797550.1 ENST00000797550.1_9_63_+ 9–63 7590.30 21.95 14.12 30.78 ENST00000797550 lncRNA metanephros (Tissue)
ENST00000797550.1 ENST00000797550.1_9_52_+ 9–52 914.00 2.64 1.70 59.2 ENST00000797550 lncRNA metanephros (Tissue)
ENST00000806893.1 ENST00000806893.1_425_447_+ 425–447 584173.00 87.93 1086.83 94.49 MIR181A1HG-212 lncRNA metanephros (Tissue)
ENST00000806893.1 ENST00000806893.1_465_486_+ 465–486 1097.00 0.17 2.04 100.0 MIR181A1HG-212 lncRNA metanephros (Tissue)
ENST00000812667.1 ENST00000812667.1_308_348_+ 308–348 198.00 9.09 0.37 100.0 C19orf48P-218 lncRNA metanephros (Tissue)
ENST00000812667.1 ENST00000812667.1_307_393_+ 307–393 878.00 40.29 1.63 100.0 C19orf48P-218 lncRNA metanephros (Tissue)
ENST00000815283.1 ENST00000815283.1_298_361_+ 298–361 17874.00 88.05 33.25 94.67 SNHG18-220 lncRNA metanephros (Tissue)
ENST00000817026.1 ENST00000817026.1_659_679_+ 659–679 157.00 19.65 0.29 100.0 ENST00000817026 lncRNA metanephros (Tissue)
ENST00000823279.1 ENST00000823279.1_109_169_+ 109–169 1413.69 2.00 2.63 48.9 ENST00000823279 lncRNA metanephros (Tissue)
ENST00000823279.1 ENST00000823279.1_126_169_+ 126–169 938.00 1.33 1.75 100.0 ENST00000823279 lncRNA metanephros (Tissue)
ENST00000823279.1 ENST00000823279.1_103_169_+ 103–169 980.71 1.39 1.82 34.89 ENST00000823279 lncRNA metanephros (Tissue)
ENST00000823279.1 ENST00000823279.1_86_169_+ 86–169 4413.00 6.25 8.21 100.0 ENST00000823279 lncRNA metanephros (Tissue)