ENCFF001RMF

Library Details

Organism: Homo Sapiens
Biosample: metanephros (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFU
Description: Part of ENCODE experiment ENCSR000AFU. The libraries contained in this experiment come from human fetal kidney tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000823279.1 ENST00000823279.1_78_169_+ 78–169 17157.00 24.31 31.92 99.05 ENST00000823279 lncRNA metanephros (Tissue)
ENST00000823279.1 ENST00000823279.1_107_169_+ 107–169 2603.44 3.69 4.84 44.27 ENST00000823279 lncRNA metanephros (Tissue)
ENST00000823279.1 ENST00000823279.1_105_169_+ 105–169 2506.16 3.55 4.66 47.57 ENST00000823279 lncRNA metanephros (Tissue)
ENST00000823279.1 ENST00000823279.1_131_169_+ 131–169 4655.00 6.60 8.66 77.16 ENST00000823279 lncRNA metanephros (Tissue)
ENST00000823279.1 ENST00000823279.1_151_169_+ 151–169 2973.55 4.21 5.53 37.27 ENST00000823279 lncRNA metanephros (Tissue)
ENST00000823801.1 ENST00000823801.1_153_169_+ 153–169 6453.43 9.15 12.01 62.02 ENST00000823801 lncRNA metanephros (Tissue)
ENST00000827714.1 ENST00000827714.1_110_129_+ 110–129 731.00 39.77 1.36 44.49 ENST00000827714 lncRNA metanephros (Tissue)
ENST00000827714.1 ENST00000827714.1_110_131_+ 110–131 912.00 49.62 1.70 55.51 ENST00000827714 lncRNA metanephros (Tissue)
ENST00000828033.1 ENST00000828033.1_252_322_+ 252–322 3630.00 5.27 6.75 100.0 GAS5-377 lncRNA metanephros (Tissue)
ENST00000828033.1 ENST00000828033.1_278_318_+ 278–318 210.00 0.30 0.39 100.0 GAS5-377 lncRNA metanephros (Tissue)
ENST00000828033.1 ENST00000828033.1_290_318_+ 290–318 976.00 1.42 1.82 100.0 GAS5-377 lncRNA metanephros (Tissue)
ENST00000828033.1 ENST00000828033.1_252_318_+ 252–318 61438.00 89.23 114.30 100.0 GAS5-377 lncRNA metanephros (Tissue)
ENST00000830954.1 ENST00000830954.1_968_989_+ 968–989 1749.00 95.00 3.25 100.0 MIR205HG-245 lncRNA metanephros (Tissue)
ENST00000833535.1 ENST00000833535.1_763_828_+ 763–828 116.00 4.06 0.22 100.0 TAF12-DT-204 lncRNA metanephros (Tissue)
ENST00000836993.1 ENST00000836993.1_387_463_+ 387–463 361654.00 94.72 672.84 99.75 ZFAS1-238 lncRNA metanephros (Tissue)
ENST00000836993.1 ENST00000836993.1_422_463_+ 422–463 780.00 0.20 1.45 100.0 ZFAS1-238 lncRNA metanephros (Tissue)
ENST00000836993.1 ENST00000836993.1_402_463_+ 402–463 1848.00 0.48 3.44 100.0 ZFAS1-238 lncRNA metanephros (Tissue)
ENST00000836993.1 ENST00000836993.1_410_463_+ 410–463 2699.00 0.71 5.02 100.0 ZFAS1-238 lncRNA metanephros (Tissue)
ENST00000836997.1 ENST00000836997.1_305_352_+ 305–352 5879.00 6.20 10.94 100.0 ZFAS1-242 lncRNA metanephros (Tissue)
ENST00000836997.1 ENST00000836997.1_305_380_+ 305–380 86252.00 90.90 160.47 100.0 ZFAS1-242 lncRNA metanephros (Tissue)
ENST00000837997.1 ENST00000837997.1_211_224_+ 211–224 536.00 58.64 1.00 100.0 ENST00000837997 lncRNA metanephros (Tissue)
ENST00000837997.1 ENST00000837997.1_214_225_+ 214–225 88.00 9.63 0.16 100.0 ENST00000837997 lncRNA metanephros (Tissue)
ENST00000839036.1 ENST00000839036.1_40_61_+ 40–61 3070.00 72.32 5.71 80.09 ENST00000839036 lncRNA metanephros (Tissue)
ENST00000849527.1 ENST00000849527.1_293_307_+ 293–307 30.00 23.26 0.06 100.0 ENST00000849527 lncRNA metanephros (Tissue)
TRNA-TRANSCRIPT-CHR1-121016845 tRNA-transcript-chr1-121016845_3_32_+ 3–32 6781.00 78.69 12.62 89.47 TRNA-TRANSCRIPT-CHR1-121016845 Gly tRNA metanephros (Tissue)