ENCFF001RMF

Library Details

Organism: Homo Sapiens
Biosample: metanephros (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFU
Description: Part of ENCODE experiment ENCSR000AFU. The libraries contained in this experiment come from human fetal kidney tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000760093.1 ENST00000760093.1_77_108_+ 77–108 50.00 4.45 0.09 100.0 ENST00000760093 lncRNA metanephros (Tissue)
ENST00000760397.1 ENST00000760397.1_331_421_+ 331–421 150017.00 84.13 279.10 89.74 SNHG14-356 lncRNA metanephros (Tissue)
ENST00000762395.1 ENST00000762395.1_325_354_+ 325–354 679.00 12.01 1.26 78.95 LINC02806-241 lncRNA metanephros (Tissue)
ENST00000762395.1 ENST00000762395.1_325_377_+ 325–377 31.00 0.55 0.06 100.0 LINC02806-241 lncRNA metanephros (Tissue)
ENST00000762395.1 ENST00000762395.1_324_357_+ 324–357 2191.00 38.76 4.08 80.73 LINC02806-241 lncRNA metanephros (Tissue)
ENST00000762395.1 ENST00000762395.1_307_324_+ 307–324 3.00 0.05 0.01 100.0 LINC02806-241 lncRNA metanephros (Tissue)
ENST00000766977.1 ENST00000766977.1_604_615_+ 604–615 2836.00 88.90 5.28 100.0 EHBP1-AS1-210 lncRNA metanephros (Tissue)
ENST00000770398.1 ENST00000770398.1_425_437_+ 425–437 39.00 3.31 0.07 100.0 ENST00000770398 lncRNA metanephros (Tissue)
ENST00000770398.1 ENST00000770398.1_481_509_+ 481–509 860.00 73.01 1.60 100.0 ENST00000770398 lncRNA metanephros (Tissue)
ENST00000770398.1 ENST00000770398.1_425_456_+ 425–456 10.00 0.85 0.02 100.0 ENST00000770398 lncRNA metanephros (Tissue)
ENST00000771298.1 ENST00000771298.1_1591_1611_+ 1591–1611 39.00 0.27 0.07 100.0 ENST00000771298 lncRNA metanephros (Tissue)
ENST00000771298.1 ENST00000771298.1_448_479_+ 448–479 22.00 0.15 0.04 100.0 ENST00000771298 lncRNA metanephros (Tissue)
ENST00000771298.1 ENST00000771298.1_1591_1621_+ 1591–1621 11782.00 82.40 21.92 94.91 ENST00000771298 lncRNA metanephros (Tissue)
ENST00000771298.1 ENST00000771298.1_485_522_+ 485–522 17.00 0.12 0.03 100.0 ENST00000771298 lncRNA metanephros (Tissue)
ENST00000772672.1 ENST00000772672.1_26_113_+ 26–113 8159.00 58.66 15.18 100.0 ENST00000772672 lncRNA metanephros (Tissue)
ENST00000772672.1 ENST00000772672.1_21_113_+ 21–113 4.00 0.03 0.01 100.0 ENST00000772672 lncRNA metanephros (Tissue)
ENST00000772672.1 ENST00000772672.1_91_113_+ 91–113 182.00 1.31 0.34 100.0 ENST00000772672 lncRNA metanephros (Tissue)
ENST00000773843.1 ENST00000773843.1_422_435_+ 422–435 3026.00 73.68 5.63 100.0 ENST00000773843 lncRNA metanephros (Tissue)
ENST00000775062.1 ENST00000775062.1_1327_1402_+ 1327–1402 32.00 0.02 0.06 100.0 SNHG12-223 lncRNA metanephros (Tissue)
ENST00000775062.1 ENST00000775062.1_1328_1392_+ 1328–1392 62107.00 47.22 115.55 95.19 SNHG12-223 lncRNA metanephros (Tissue)
ENST00000775062.1 ENST00000775062.1_1328_1395_+ 1328–1395 68528.00 52.10 127.49 99.3 SNHG12-223 lncRNA metanephros (Tissue)
ENST00000776279.1 ENST00000776279.1_205_232_+ 205–232 5427.00 0.31 10.10 100.0 SNHG25-206 lncRNA metanephros (Tissue)
ENST00000776279.1 ENST00000776279.1_161_234_+ 161–234 1186997.00 68.28 2208.36 69.82 SNHG25-206 lncRNA metanephros (Tissue)
ENST00000776279.1 ENST00000776279.1_161_206_+ 161–206 1863.00 0.11 3.47 100.0 SNHG25-206 lncRNA metanephros (Tissue)
ENST00000776279.1 ENST00000776279.1_176_234_+ 176–234 369.97 0.02 0.69 51.38 SNHG25-206 lncRNA metanephros (Tissue)