ENCFF001RMF

Library Details

Organism: Homo Sapiens
Biosample: metanephros (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFU
Description: Part of ENCODE experiment ENCSR000AFU. The libraries contained in this experiment come from human fetal kidney tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000658769.1 ENST00000658769.1_810_903_+ 810–903 19664.00 46.01 36.58 90.16 SNHG14-261 lncRNA metanephros (Tissue)
ENST00000658801.2 ENST00000658801.2_139_171_+ 139–171 29.00 1.66 0.05 100.0 LIMD1-AS1-204 lncRNA metanephros (Tissue)
ENST00000658801.2 ENST00000658801.2_139_214_+ 139–214 1.00 0.06 0.00 100.0 LIMD1-AS1-204 lncRNA metanephros (Tissue)
ENST00000658801.2 ENST00000658801.2_178_214_+ 178–214 266.00 15.23 0.49 79.88 LIMD1-AS1-204 lncRNA metanephros (Tissue)
ENST00000659483.3 ENST00000659483.3_1071_1093_+ 1071–1093 65868.00 82.10 122.54 95.39 MIR99AHG-262 lncRNA metanephros (Tissue)
ENST00000659483.3 ENST00000659483.3_1110_1131_+ 1110–1131 2289.00 2.85 4.26 100.0 MIR99AHG-262 lncRNA metanephros (Tissue)
ENST00000660376.1 ENST00000660376.1_1_78_+ 1–78 8.00 2.39 0.01 100.0 SNHG14-266 lncRNA metanephros (Tissue)
ENST00000660956.1 ENST00000660956.1_2_92_+ 2–92 1142.00 65.03 2.12 100.0 SNHG14-270 lncRNA metanephros (Tissue)
ENST00000661541.1 ENST00000661541.1_446_534_+ 446–534 686.00 0.62 1.28 100.0 SNHG14-275 lncRNA metanephros (Tissue)
ENST00000661688.1 ENST00000661688.1_965_986_+ 965–986 3.00 0.28 0.01 100.0 MIR9-2HG-225 lncRNA metanephros (Tissue)
ENST00000661688.1 ENST00000661688.1_928_950_+ 928–950 846.00 80.34 1.57 90.87 MIR9-2HG-225 lncRNA metanephros (Tissue)
ENST00000661815.1 ENST00000661815.1_36_69_+ 36–69 344.00 21.76 0.64 100.0 MEG8-233 lncRNA metanephros (Tissue)
ENST00000661815.1 ENST00000661815.1_2_70_+ 2–70 551.00 34.85 1.03 100.0 MEG8-233 lncRNA metanephros (Tissue)
ENST00000661889.1 ENST00000661889.1_1145_1233_+ 1145–1233 3636.00 3.88 6.76 100.0 SNHG14-278 lncRNA metanephros (Tissue)
ENST00000661889.1 ENST00000661889.1_2_92_+ 2–92 68564.00 73.22 127.56 89.38 SNHG14-278 lncRNA metanephros (Tissue)
ENST00000662228.1 ENST00000662228.1_1206_1269_+ 1206–1269 668.00 38.84 1.24 100.0 MEG8-234 lncRNA metanephros (Tissue)
ENST00000662228.1 ENST00000662228.1_1205_1272_+ 1205–1272 214.00 12.44 0.40 100.0 MEG8-234 lncRNA metanephros (Tissue)
ENST00000663187.1 ENST00000663187.1_2_76_+ 2–76 2534.00 84.27 4.71 100.0 SNHG17-252 lncRNA metanephros (Tissue)
ENST00000663945.1 ENST00000663945.1_3_89_+ 3–89 8317.00 28.24 15.47 72.16 SNHG14-288 lncRNA metanephros (Tissue)
ENST00000663945.1 ENST00000663945.1_2_92_+ 2–92 17293.00 58.72 32.17 88.05 SNHG14-288 lncRNA metanephros (Tissue)
ENST00000665397.1 ENST00000665397.1_2_81_+ 2–81 19.00 6.27 0.04 100.0 SNHG14-295 lncRNA metanephros (Tissue)
ENST00000665787.1 ENST00000665787.1_2059_2127_+ 2059–2127 1297.00 76.16 2.41 100.0 MEG8-240 lncRNA metanephros (Tissue)
ENST00000666022.1 ENST00000666022.1_1_88_+ 1–88 10229.00 39.06 19.03 100.0 SNHG14-303 lncRNA metanephros (Tissue)
ENST00000666663.1 ENST00000666663.1_35_81_+ 35–81 22.00 1.85 0.04 100.0 SNHG14-306 lncRNA metanephros (Tissue)
ENST00000666663.1 ENST00000666663.1_59_82_+ 59–82 8.00 0.67 0.01 100.0 SNHG14-306 lncRNA metanephros (Tissue)