ENCFF001RMF

Library Details

Organism: Homo Sapiens
Biosample: metanephros (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFU
Description: Part of ENCODE experiment ENCSR000AFU. The libraries contained in this experiment come from human fetal kidney tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000652769.2 ENST00000652769.2_3101_3122_+ 3101–3122 9849.00 2.99 18.32 100.0 MIRLET7A1HG-203 lncRNA metanephros (Tissue)
ENST00000653102.1 ENST00000653102.1_9_77_+ 9–77 6942.00 91.49 12.92 100.0 MEG8-225 lncRNA metanephros (Tissue)
ENST00000654356.2 ENST00000654356.2_1000_1070_+ 1000–1070 329270.00 81.38 612.59 100.0 SNHG29-232 lncRNA metanephros (Tissue)
ENST00000654356.2 ENST00000654356.2_1368_1394_+ 1368–1394 202.00 0.05 0.38 100.0 SNHG29-232 lncRNA metanephros (Tissue)
ENST00000654356.2 ENST00000654356.2_1402_1442_+ 1402–1442 2116.00 0.52 3.94 100.0 SNHG29-232 lncRNA metanephros (Tissue)
ENST00000654356.2 ENST00000654356.2_1393_1442_+ 1393–1442 1331.00 0.33 2.48 100.0 SNHG29-232 lncRNA metanephros (Tissue)
ENST00000654356.2 ENST00000654356.2_469_540_+ 469–540 21643.00 5.35 40.27 100.0 SNHG29-232 lncRNA metanephros (Tissue)
ENST00000654356.2 ENST00000654356.2_1368_1442_+ 1368–1442 41408.00 10.23 77.04 100.0 SNHG29-232 lncRNA metanephros (Tissue)
ENST00000655143.1 ENST00000655143.1_3091_3153_+ 3091–3153 820.00 0.45 1.53 100.0 SNHG14-234 lncRNA metanephros (Tissue)
ENST00000655143.1 ENST00000655143.1_1868_1961_+ 1868–1961 76448.00 42.02 142.23 95.62 SNHG14-234 lncRNA metanephros (Tissue)
ENST00000655143.1 ENST00000655143.1_80_95_+ 80–95 749.00 0.41 1.39 100.0 SNHG14-234 lncRNA metanephros (Tissue)
ENST00000655143.1 ENST00000655143.1_682_775_+ 682–775 9954.00 5.47 18.52 100.0 SNHG14-234 lncRNA metanephros (Tissue)
ENST00000655143.1 ENST00000655143.1_3091_3184_+ 3091–3184 30789.00 16.92 57.28 100.0 SNHG14-234 lncRNA metanephros (Tissue)
ENST00000655143.1 ENST00000655143.1_2_94_+ 2–94 20250.00 11.13 37.67 96.58 SNHG14-234 lncRNA metanephros (Tissue)
ENST00000655317.2 ENST00000655317.2_281_353_+ 281–353 1581.00 2.00 2.94 26.88 ENST00000655317 lncRNA metanephros (Tissue)
ENST00000655317.2 ENST00000655317.2_293_352_+ 293–352 16510.00 20.93 30.72 100.0 ENST00000655317 lncRNA metanephros (Tissue)
ENST00000655317.2 ENST00000655317.2_283_352_+ 283–352 8065.00 10.22 15.00 71.39 ENST00000655317 lncRNA metanephros (Tissue)
ENST00000655317.2 ENST00000655317.2_271_353_+ 271–353 3244.00 4.11 6.04 100.0 ENST00000655317 lncRNA metanephros (Tissue)
ENST00000655600.1 ENST00000655600.1_807_842_+ 807–842 152.00 2.69 0.28 77.16 LINC01962-202 lncRNA metanephros (Tissue)
ENST00000655600.1 ENST00000655600.1_807_839_+ 807–839 4622.00 81.65 8.60 100.0 LINC01962-202 lncRNA metanephros (Tissue)
ENST00000655600.1 ENST00000655600.1_807_829_+ 807–829 156.00 2.76 0.29 100.0 LINC01962-202 lncRNA metanephros (Tissue)
ENST00000655965.1 ENST00000655965.1_2745_2837_+ 2745–2837 24478.00 39.55 45.54 94.78 SNHG14-241 lncRNA metanephros (Tissue)
ENST00000656987.1 ENST00000656987.1_14_79_+ 14–79 22037.00 96.58 41.00 100.0 MEG8-228 lncRNA metanephros (Tissue)
ENST00000657237.1 ENST00000657237.1_1408_1496_+ 1408–1496 4370.00 20.06 8.13 100.0 SNHG14-254 lncRNA metanephros (Tissue)
ENST00000658769.1 ENST00000658769.1_2_96_+ 2–96 8075.00 18.89 15.02 100.0 SNHG14-261 lncRNA metanephros (Tissue)