ENCFF001RMF

Library Details

Organism: Homo Sapiens
Biosample: metanephros (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFU
Description: Part of ENCODE experiment ENCSR000AFU. The libraries contained in this experiment come from human fetal kidney tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000612463.1 ENST00000612463.1_81_123_+ 81–123 137.91 1.12 0.26 44.49 RNA5-8SN2-201 rRNA metanephros (Tissue)
ENST00000612463.1 ENST00000612463.1_1_50_+ 1–50 16.00 0.13 0.03 100.0 RNA5-8SN2-201 rRNA metanephros (Tissue)
ENST00000612463.1 ENST00000612463.1_1_25_+ 1–25 322.00 2.62 0.60 100.0 RNA5-8SN2-201 rRNA metanephros (Tissue)
ENST00000612463.1 ENST00000612463.1_10_37_+ 10–37 195.00 1.59 0.36 100.0 RNA5-8SN2-201 rRNA metanephros (Tissue)
ENST00000612463.1 ENST00000612463.1_1_81_+ 1–81 2191.00 17.83 4.08 60.83 RNA5-8SN2-201 rRNA metanephros (Tissue)
ENST00000612463.1 ENST00000612463.1_83_123_+ 83–123 170.92 1.39 0.32 55.14 RNA5-8SN2-201 rRNA metanephros (Tissue)
ENST00000615835.1 ENST00000615835.1_56_79_+ 56–79 9.00 100.00 0.02 100.0 MIR7974-201 miRNA metanephros (Tissue)
ENST00000616574.2 ENST00000616574.2_44_64_+ 44–64 9.00 23.08 0.02 100.0 MIR376A1-201 miRNA metanephros (Tissue)
ENST00000616574.2 ENST00000616574.2_7_27_+ 7–27 12.00 30.77 0.02 100.0 MIR376A1-201 miRNA metanephros (Tissue)
ENST00000617785.1 ENST00000617785.1_155_187_+ 155–187 1707.00 0.76 3.18 100.0 U2.3-201 snRNA metanephros (Tissue)
ENST00000617785.1 ENST00000617785.1_93_187_+ 93–187 1491.44 0.66 2.77 37.02 U2.3-201 snRNA metanephros (Tissue)
ENST00000617785.1 ENST00000617785.1_1_95_+ 1–95 146772.00 65.18 273.06 99.16 U2.3-201 snRNA metanephros (Tissue)
ENST00000617785.1 ENST00000617785.1_99_187_+ 99–187 13.00 0.01 0.02 100.0 U2.3-201 snRNA metanephros (Tissue)
ENST00000617785.1 ENST00000617785.1_1_87_+ 1–87 18615.00 8.27 34.63 79.97 U2.3-201 snRNA metanephros (Tissue)
ENST00000617785.1 ENST00000617785.1_1_64_+ 1–64 4672.00 2.07 8.69 36.57 U2.3-201 snRNA metanephros (Tissue)
ENST00000617785.1 ENST00000617785.1_1_70_+ 1–70 1661.00 0.74 3.09 78.5 U2.3-201 snRNA metanephros (Tissue)
ENST00000617785.1 ENST00000617785.1_95_188_+ 95–188 2933.31 1.30 5.46 72.8 U2.3-201 snRNA metanephros (Tissue)
ENST00000617785.1 ENST00000617785.1_170_188_+ 170–188 225.00 0.10 0.42 100.0 U2.3-201 snRNA metanephros (Tissue)
ENST00000617785.1 ENST00000617785.1_93_116_+ 93–116 8.00 0.00 0.01 100.0 U2.3-201 snRNA metanephros (Tissue)
ENST00000617785.1 ENST00000617785.1_1_75_+ 1–75 232.00 0.10 0.43 100.0 U2.3-201 snRNA metanephros (Tissue)
ENST00000617785.1 ENST00000617785.1_22_116_+ 22–116 215.00 0.10 0.40 100.0 U2.3-201 snRNA metanephros (Tissue)
ENST00000617785.1 ENST00000617785.1_1_90_+ 1–90 8894.90 3.95 16.55 51.18 U2.3-201 snRNA metanephros (Tissue)
ENST00000617785.1 ENST00000617785.1_1_92_+ 1–92 6278.59 2.79 11.68 47.38 U2.3-201 snRNA metanephros (Tissue)
ENST00000619225.1 ENST00000619225.1_155_188_+ 155–188 3795.00 1.72 7.06 100.0 U2.6-201 snRNA metanephros (Tissue)
ENST00000619323.3 ENST00000619323.3_499_516_+ 499–516 665.00 1.13 1.24 65.84 ENST00000619323 lncRNA metanephros (Tissue)