ENCFF001RME

Library Details

Organism: Homo Sapiens
Biosample: occipital lobe (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFX
Description: Part of ENCODE experiment ENCSR000AFX. The libraries contained in this experiment come from human fetal occipital lobe tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000362883.1 ENST00000362883.1_35_70_+ 35–70 434.00 14.84 0.92 100.0 SNORD104-201 snoRNA occipital lobe (Tissue)
ENST00000362912.1 ENST00000362912.1_2_82_+ 2–82 57540.00 65.64 121.80 96.56 SNORD115-9-201 snoRNA occipital lobe (Tissue)
ENST00000362973.1 ENST00000362973.1_96_117_+ 96–117 1485.00 39.40 3.14 78.32 RNA5SP358-201 rRNA pseudogene occipital lobe (Tissue)
ENST00000363124.1 ENST00000363124.1_17_32_+ 17–32 35.00 2.23 0.07 77.78 RNA5SP145-201 rRNA pseudogene occipital lobe (Tissue)
ENST00000363182.1 ENST00000363182.1_1_32_+ 1–32 3438.00 32.94 7.28 100.0 Y_RNA.105-201 misc RNA occipital lobe (Tissue)
ENST00000363194.1 ENST00000363194.1_1_32_+ 1–32 1730.00 20.43 3.66 100.0 RNY4P9-201 misc RNA occipital lobe (Tissue)
ENST00000363286.1 ENST00000363286.1_63_116_+ 63–116 578.00 3.80 1.22 100.0 RNU5B-1-201 snRNA occipital lobe (Tissue)
ENST00000363286.1 ENST00000363286.1_68_116_+ 68–116 236.00 1.55 0.50 100.0 RNU5B-1-201 snRNA occipital lobe (Tissue)
ENST00000363286.1 ENST00000363286.1_55_116_+ 55–116 349.00 2.29 0.74 100.0 RNU5B-1-201 snRNA occipital lobe (Tissue)
ENST00000363286.1 ENST00000363286.1_1_78_+ 1–78 1347.00 8.85 2.85 71.38 RNU5B-1-201 snRNA occipital lobe (Tissue)
ENST00000363286.1 ENST00000363286.1_1_69_+ 1–69 128.00 0.84 0.27 100.0 RNU5B-1-201 snRNA occipital lobe (Tissue)
ENST00000363286.1 ENST00000363286.1_1_86_+ 1–86 3640.00 23.91 7.71 100.0 RNU5B-1-201 snRNA occipital lobe (Tissue)
ENST00000363293.1 ENST00000363293.1_2_82_+ 2–82 176562.00 93.57 373.76 98.3 SNORD115-18-201 snoRNA occipital lobe (Tissue)
ENST00000363341.1 ENST00000363341.1_1_32_+ 1–32 55606.00 83.88 117.71 98.26 RNY4P27-201 misc RNA occipital lobe (Tissue)
ENST00000363341.1 ENST00000363341.1_1_36_+ 1–36 1046.00 1.58 2.21 51.5 RNY4P27-201 misc RNA occipital lobe (Tissue)
ENST00000363444.1 ENST00000363444.1_74_99_+ 74–99 2469.00 21.42 5.23 100.0 Y_RNA.136-201 misc RNA occipital lobe (Tissue)
ENST00000363608.1 ENST00000363608.1_2_82_+ 2–82 48975.00 64.69 103.67 100.0 SNORD115-41-201 snoRNA occipital lobe (Tissue)
ENST00000363633.1 ENST00000363633.1_2_82_+ 2–82 25511.00 45.14 54.00 100.0 SNORD115-5-201 snoRNA occipital lobe (Tissue)
ENST00000363723.1 ENST00000363723.1_2_82_+ 2–82 10064.00 56.08 21.30 100.0 SNORD115-33-201 snoRNA occipital lobe (Tissue)
ENST00000363742.1 ENST00000363742.1_4_67_+ 4–67 3574.00 90.44 7.57 98.73 SNORD114-25-201 snoRNA occipital lobe (Tissue)
ENST00000363762.1 ENST00000363762.1_3_72_+ 3–72 11912.00 97.67 25.22 100.0 SNORD113-7-201 snoRNA occipital lobe (Tissue)
ENST00000363856.1 ENST00000363856.1_2_82_+ 2–82 10723.00 36.99 22.70 100.0 SNORD115-8-201 snoRNA occipital lobe (Tissue)
ENST00000363872.1 ENST00000363872.1_74_98_+ 74–98 1221.00 43.98 2.58 100.0 Y_RNA.181-201 misc RNA occipital lobe (Tissue)
ENST00000363887.1 ENST00000363887.1_2_82_+ 2–82 27247.00 51.49 57.68 100.0 SNORD115-16-201 snoRNA occipital lobe (Tissue)
ENST00000364079.1 ENST00000364079.1_2_82_+ 2–82 9922.00 49.24 21.00 100.0 SNORD115-32-201 snoRNA occipital lobe (Tissue)