ENCFF001RME

Library Details

Organism: Homo Sapiens
Biosample: occipital lobe (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFX
Description: Part of ENCODE experiment ENCSR000AFX. The libraries contained in this experiment come from human fetal occipital lobe tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000364117.1 ENST00000364117.1_2_82_+ 2–82 10359.00 52.90 21.93 100.0 SNORD115-30-201 snoRNA occipital lobe (Tissue)
ENST00000364228.1 ENST00000364228.1_1_32_+ 1–32 15828.56 31.11 33.51 71.81 RNY1-201 misc RNA occipital lobe (Tissue)
ENST00000364228.1 ENST00000364228.1_24_109_+ 24–109 4957.00 9.74 10.49 100.0 RNY1-201 misc RNA occipital lobe (Tissue)
ENST00000364228.1 ENST00000364228.1_1_30_+ 1–30 4061.66 7.98 8.60 27.39 RNY1-201 misc RNA occipital lobe (Tissue)
ENST00000364228.1 ENST00000364228.1_1_63_+ 1–63 1360.00 2.67 2.88 100.0 RNY1-201 misc RNA occipital lobe (Tissue)
ENST00000364228.1 ENST00000364228.1_1_39_+ 1–39 593.00 1.17 1.26 100.0 RNY1-201 misc RNA occipital lobe (Tissue)
ENST00000364273.1 ENST00000364273.1_2_82_+ 2–82 15399.00 36.75 32.60 100.0 SNORD115-42-201 snoRNA occipital lobe (Tissue)
ENST00000364315.1 ENST00000364315.1_101_119_+ 101–119 533.04 9.62 1.13 36.94 RNA5SP202-201 rRNA pseudogene occipital lobe (Tissue)
ENST00000364315.1 ENST00000364315.1_35_95_+ 35–95 355.75 6.42 0.75 80.3 RNA5SP202-201 rRNA pseudogene occipital lobe (Tissue)
ENST00000364315.1 ENST00000364315.1_87_119_+ 87–119 188.00 3.39 0.40 100.0 RNA5SP202-201 rRNA pseudogene occipital lobe (Tissue)
ENST00000364315.1 ENST00000364315.1_71_95_+ 71–95 19.00 0.34 0.04 100.0 RNA5SP202-201 rRNA pseudogene occipital lobe (Tissue)
ENST00000364315.1 ENST00000364315.1_37_95_+ 37–95 35.19 0.64 0.07 7.91 RNA5SP202-201 rRNA pseudogene occipital lobe (Tissue)
ENST00000364315.1 ENST00000364315.1_62_119_+ 62–119 21.00 0.38 0.04 100.0 RNA5SP202-201 rRNA pseudogene occipital lobe (Tissue)
ENST00000364315.1 ENST00000364315.1_71_119_+ 71–119 1.00 0.02 0.00 100.0 RNA5SP202-201 rRNA pseudogene occipital lobe (Tissue)
ENST00000364315.1 ENST00000364315.1_83_119_+ 83–119 254.00 4.58 0.54 100.0 RNA5SP202-201 rRNA pseudogene occipital lobe (Tissue)
ENST00000364315.1 ENST00000364315.1_52_119_+ 52–119 10.00 0.18 0.02 100.0 RNA5SP202-201 rRNA pseudogene occipital lobe (Tissue)
ENST00000364370.1 ENST00000364370.1_35_67_+ 35–67 4049.00 64.31 8.57 100.0 SNORD114-9-201 snoRNA occipital lobe (Tissue)
ENST00000364370.1 ENST00000364370.1_4_67_+ 4–67 1595.00 25.33 3.38 100.0 SNORD114-9-201 snoRNA occipital lobe (Tissue)
ENST00000364409.1 ENST00000364409.1_68_90_+ 68–90 627.00 2.05 1.33 100.0 Y_RNA.234-201 misc RNA occipital lobe (Tissue)
ENST00000364451.1 ENST00000364451.1_1_95_+ 1–95 2.00 0.04 0.00 100.0 RNA5S9-201 rRNA occipital lobe (Tissue)
ENST00000364461.1 ENST00000364461.1_2_82_+ 2–82 11761.00 70.44 24.90 100.0 SNORD115-23-201 snoRNA occipital lobe (Tissue)
ENST00000364543.1 ENST00000364543.1_1_39_+ 1–39 18.00 1.85 0.04 100.0 RNA5SP141-201 rRNA pseudogene occipital lobe (Tissue)
ENST00000364687.1 ENST00000364687.1_34_67_+ 34–67 328.00 73.38 0.69 100.0 SNORD114-15-201 snoRNA occipital lobe (Tissue)
ENST00000364722.1 ENST00000364722.1_2_30_+ 2–30 1354.00 35.70 2.87 100.0 ENST00000364722 snoRNA occipital lobe (Tissue)
ENST00000364809.1 ENST00000364809.1_2_81_+ 2–81 18553.00 40.43 39.27 100.0 SNORD115-15-201 snoRNA occipital lobe (Tissue)