ENCFF001RME

Library Details

Organism: Homo Sapiens
Biosample: occipital lobe (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFX
Description: Part of ENCODE experiment ENCSR000AFX. The libraries contained in this experiment come from human fetal occipital lobe tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000776279.1 ENST00000776279.1_196_234_+ 196–234 2016.00 0.13 4.27 82.29 SNHG25-206 lncRNA occipital lobe (Tissue)
ENST00000776279.1 ENST00000776279.1_184_234_+ 184–234 120.00 0.01 0.25 100.0 SNHG25-206 lncRNA occipital lobe (Tissue)
ENST00000778783.1 ENST00000778783.1_84_171_+ 84–171 1915.00 80.53 4.05 100.0 ENST00000778783 lncRNA occipital lobe (Tissue)
ENST00000779378.1 ENST00000779378.1_905_928_+ 905–928 359.00 81.78 0.76 87.78 MIR155HG-205 lncRNA occipital lobe (Tissue)
ENST00000785178.1 ENST00000785178.1_899_938_+ 899–938 198.00 5.28 0.42 100.0 ENST00000785178 lncRNA occipital lobe (Tissue)
ENST00000786284.1 ENST00000786284.1_38_80_+ 38–80 51.00 5.36 0.11 83.61 ENST00000786284 lncRNA occipital lobe (Tissue)
ENST00000786284.1 ENST00000786284.1_46_80_+ 46–80 171.00 17.98 0.36 100.0 ENST00000786284 lncRNA occipital lobe (Tissue)
ENST00000786284.1 ENST00000786284.1_40_80_+ 40–80 10.00 1.05 0.02 27.78 ENST00000786284 lncRNA occipital lobe (Tissue)
ENST00000788343.1 ENST00000788343.1_17_107_+ 17–107 6895.00 68.02 14.60 77.9 ENST00000788343 lncRNA occipital lobe (Tissue)
ENST00000797550.1 ENST00000797550.1_7_63_+ 7–63 2548.90 32.07 5.40 49.33 ENST00000797550 lncRNA occipital lobe (Tissue)
ENST00000797550.1 ENST00000797550.1_9_63_+ 9–63 1158.90 14.58 2.45 22.43 ENST00000797550 lncRNA occipital lobe (Tissue)
ENST00000797550.1 ENST00000797550.1_9_52_+ 9–52 272.00 3.42 0.58 46.18 ENST00000797550 lncRNA occipital lobe (Tissue)
ENST00000806893.1 ENST00000806893.1_425_447_+ 425–447 1429702.00 82.82 3026.47 92.14 MIR181A1HG-212 lncRNA occipital lobe (Tissue)
ENST00000806893.1 ENST00000806893.1_465_486_+ 465–486 18692.00 1.08 39.57 100.0 MIR181A1HG-212 lncRNA occipital lobe (Tissue)
ENST00000812667.1 ENST00000812667.1_308_348_+ 308–348 25.00 3.64 0.05 100.0 C19orf48P-218 lncRNA occipital lobe (Tissue)
ENST00000812667.1 ENST00000812667.1_307_393_+ 307–393 328.00 47.81 0.69 100.0 C19orf48P-218 lncRNA occipital lobe (Tissue)
ENST00000815283.1 ENST00000815283.1_298_361_+ 298–361 982.00 83.36 2.08 91.6 SNHG18-220 lncRNA occipital lobe (Tissue)
ENST00000817026.1 ENST00000817026.1_659_679_+ 659–679 124.00 24.22 0.26 100.0 ENST00000817026 lncRNA occipital lobe (Tissue)
ENST00000823279.1 ENST00000823279.1_86_169_+ 86–169 121.00 0.48 0.26 100.0 ENST00000823279 lncRNA occipital lobe (Tissue)
ENST00000823279.1 ENST00000823279.1_126_169_+ 126–169 621.00 2.47 1.31 100.0 ENST00000823279 lncRNA occipital lobe (Tissue)
ENST00000823279.1 ENST00000823279.1_109_169_+ 109–169 563.57 2.24 1.19 41.75 ENST00000823279 lncRNA occipital lobe (Tissue)
ENST00000823279.1 ENST00000823279.1_103_169_+ 103–169 696.78 2.77 1.47 53.85 ENST00000823279 lncRNA occipital lobe (Tissue)
ENST00000823279.1 ENST00000823279.1_78_169_+ 78–169 4448.00 17.69 9.42 99.35 ENST00000823279 lncRNA occipital lobe (Tissue)
ENST00000823279.1 ENST00000823279.1_107_169_+ 107–169 1533.64 6.10 3.25 56.59 ENST00000823279 lncRNA occipital lobe (Tissue)
ENST00000823279.1 ENST00000823279.1_105_169_+ 105–169 1153.66 4.59 2.44 40.11 ENST00000823279 lncRNA occipital lobe (Tissue)