ENCFF001RME

Library Details

Organism: Homo Sapiens
Biosample: occipital lobe (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFX
Description: Part of ENCODE experiment ENCSR000AFX. The libraries contained in this experiment come from human fetal occipital lobe tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000743202.1 ENST00000743202.1_560_577_+ 560–577 1330.00 68.95 2.82 100.0 NR2F2-AS1-327 lncRNA occipital lobe (Tissue)
ENST00000747675.1 ENST00000747675.1_817_853_+ 817–853 227.00 19.98 0.48 100.0 ENST00000747675 lncRNA occipital lobe (Tissue)
ENST00000747675.1 ENST00000747675.1_802_853_+ 802–853 49.00 4.31 0.10 39.84 ENST00000747675 lncRNA occipital lobe (Tissue)
ENST00000747675.1 ENST00000747675.1_800_853_+ 800–853 36.00 3.17 0.08 42.35 ENST00000747675 lncRNA occipital lobe (Tissue)
ENST00000747675.1 ENST00000747675.1_804_853_+ 804–853 38.00 3.35 0.08 43.68 ENST00000747675 lncRNA occipital lobe (Tissue)
ENST00000747675.1 ENST00000747675.1_812_853_+ 812–853 92.00 8.10 0.19 100.0 ENST00000747675 lncRNA occipital lobe (Tissue)
ENST00000748458.1 ENST00000748458.1_161_188_+ 161–188 1077.00 54.45 2.28 97.38 SNHG26-250 lncRNA occipital lobe (Tissue)
ENST00000748458.1 ENST00000748458.1_161_230_+ 161–230 664.00 33.57 1.41 98.37 SNHG26-250 lncRNA occipital lobe (Tissue)
ENST00000752259.1 ENST00000752259.1_405_425_+ 405–425 6.00 0.60 0.01 100.0 LINC02422-207 lncRNA occipital lobe (Tissue)
ENST00000753088.1 ENST00000753088.1_508_523_+ 508–523 28.00 1.61 0.06 100.0 ENST00000753088 lncRNA occipital lobe (Tissue)
ENST00000753088.1 ENST00000753088.1_508_542_+ 508–542 56.00 3.22 0.12 100.0 ENST00000753088 lncRNA occipital lobe (Tissue)
ENST00000756336.1 ENST00000756336.1_98_127_+ 98–127 454.18 3.70 0.96 26.73 ENST00000756336 lncRNA occipital lobe (Tissue)
ENST00000756336.1 ENST00000756336.1_133_172_+ 133–172 160.00 1.30 0.34 100.0 ENST00000756336 lncRNA occipital lobe (Tissue)
ENST00000756336.1 ENST00000756336.1_117_172_+ 117–172 166.00 1.35 0.35 100.0 ENST00000756336 lncRNA occipital lobe (Tissue)
ENST00000756336.1 ENST00000756336.1_137_172_+ 137–172 55.00 0.45 0.12 100.0 ENST00000756336 lncRNA occipital lobe (Tissue)
ENST00000756336.1 ENST00000756336.1_98_132_+ 98–132 1792.09 14.60 3.79 26.8 ENST00000756336 lncRNA occipital lobe (Tissue)
ENST00000756336.1 ENST00000756336.1_98_130_+ 98–130 5631.59 45.87 11.92 73.92 ENST00000756336 lncRNA occipital lobe (Tissue)
ENST00000756336.1 ENST00000756336.1_107_172_+ 107–172 59.60 0.49 0.13 24.03 ENST00000756336 lncRNA occipital lobe (Tissue)
ENST00000756336.1 ENST00000756336.1_98_125_+ 98–125 285.55 2.33 0.60 50.19 ENST00000756336 lncRNA occipital lobe (Tissue)
ENST00000756336.1 ENST00000756336.1_98_172_+ 98–172 335.00 2.73 0.71 100.0 ENST00000756336 lncRNA occipital lobe (Tissue)
ENST00000756336.1 ENST00000756336.1_109_172_+ 109–172 365.89 2.98 0.77 89.02 ENST00000756336 lncRNA occipital lobe (Tissue)
ENST00000756452.1 ENST00000756452.1_116_129_+ 116–129 666.00 95.55 1.41 100.0 ENST00000756452 lncRNA occipital lobe (Tissue)
ENST00000760093.1 ENST00000760093.1_80_108_+ 80–108 251.00 21.85 0.53 100.0 ENST00000760093 lncRNA occipital lobe (Tissue)
ENST00000760093.1 ENST00000760093.1_77_108_+ 77–108 28.00 2.44 0.06 100.0 ENST00000760093 lncRNA occipital lobe (Tissue)
ENST00000760397.1 ENST00000760397.1_331_421_+ 331–421 182161.00 87.97 385.61 92.45 SNHG14-356 lncRNA occipital lobe (Tissue)