ENCFF001RME

Library Details

Organism: Homo Sapiens
Biosample: occipital lobe (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFX
Description: Part of ENCODE experiment ENCSR000AFX. The libraries contained in this experiment come from human fetal occipital lobe tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000650189.1 ENST00000650189.1_167_187_+ 167–187 1908.00 83.50 4.04 100.0 DNM3OS-205 lncRNA occipital lobe (Tissue)
ENST00000650796.1 ENST00000650796.1_2858_2910_+ 2858–2910 149.00 0.02 0.32 100.0 GAS5-230 retained intron occipital lobe (Tissue)
ENST00000650796.1 ENST00000650796.1_709_770_+ 709–770 1646.00 0.25 3.48 100.0 GAS5-230 retained intron occipital lobe (Tissue)
ENST00000650796.1 ENST00000650796.1_1648_1723_+ 1648–1723 332.00 0.05 0.70 74.77 GAS5-230 retained intron occipital lobe (Tissue)
ENST00000650796.1 ENST00000650796.1_137_198_+ 137–198 7712.00 1.19 16.33 96.0 GAS5-230 retained intron occipital lobe (Tissue)
ENST00000650796.1 ENST00000650796.1_1391_1418_+ 1391–1418 25.00 0.00 0.05 100.0 GAS5-230 retained intron occipital lobe (Tissue)
ENST00000650796.1 ENST00000650796.1_2631_2663_+ 2631–2663 260.00 0.04 0.55 100.0 GAS5-230 retained intron occipital lobe (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1103_+ 1048–1103 668.00 0.10 1.41 100.0 GAS5-230 retained intron occipital lobe (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1108_+ 1048–1108 394795.00 60.67 835.72 99.82 GAS5-230 retained intron occipital lobe (Tissue)
ENST00000650796.1 ENST00000650796.1_1075_1108_+ 1075–1108 1196.00 0.18 2.53 100.0 GAS5-230 retained intron occipital lobe (Tissue)
ENST00000650796.1 ENST00000650796.1_1424_1452_+ 1424–1452 1269.00 0.19 2.69 100.0 GAS5-230 retained intron occipital lobe (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1075_+ 1048–1075 1911.00 0.29 4.05 100.0 GAS5-230 retained intron occipital lobe (Tissue)
ENST00000650796.1 ENST00000650796.1_2631_2673_+ 2631–2673 1849.00 0.28 3.91 100.0 GAS5-230 retained intron occipital lobe (Tissue)
ENST00000650796.1 ENST00000650796.1_1049_1079_+ 1049–1079 823.00 0.13 1.74 100.0 GAS5-230 retained intron occipital lobe (Tissue)
ENST00000650796.1 ENST00000650796.1_157_198_+ 157–198 80.00 0.01 0.17 100.0 GAS5-230 retained intron occipital lobe (Tissue)
ENST00000650796.1 ENST00000650796.1_160_197_+ 160–197 93.00 0.01 0.20 100.0 GAS5-230 retained intron occipital lobe (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1086_+ 1048–1086 444.00 0.07 0.94 100.0 GAS5-230 retained intron occipital lobe (Tissue)
ENST00000650796.1 ENST00000650796.1_2890_2925_+ 2890–2925 7280.00 1.12 15.41 77.32 GAS5-230 retained intron occipital lobe (Tissue)
ENST00000650796.1 ENST00000650796.1_2898_2925_+ 2898–2925 8701.00 1.34 18.42 100.0 GAS5-230 retained intron occipital lobe (Tissue)
ENST00000650796.1 ENST00000650796.1_363_440_+ 363–440 29746.00 4.57 62.97 100.0 GAS5-230 retained intron occipital lobe (Tissue)
ENST00000650796.1 ENST00000650796.1_2631_2707_+ 2631–2707 28780.00 4.42 60.92 92.86 GAS5-230 retained intron occipital lobe (Tissue)
ENST00000650796.1 ENST00000650796.1_2172_2243_+ 2172–2243 122906.00 18.89 260.17 100.0 GAS5-230 retained intron occipital lobe (Tissue)
ENST00000650796.1 ENST00000650796.1_400_440_+ 400–440 296.00 0.05 0.63 100.0 GAS5-230 retained intron occipital lobe (Tissue)
ENST00000650796.1 ENST00000650796.1_1391_1452_+ 1391–1452 1871.00 0.29 3.96 100.0 GAS5-230 retained intron occipital lobe (Tissue)
ENST00000650796.1 ENST00000650796.1_2858_2925_+ 2858–2925 19070.00 2.93 40.37 100.0 GAS5-230 retained intron occipital lobe (Tissue)