ENCFF001RME
Library Details
| Organism: | Homo Sapiens |
|---|---|
| Biosample: | occipital lobe (Tissue) |
| GEO DB ID: | Not available |
| ENCODE Experiment ID: | ENCSR000AFX |
| Description: | Part of ENCODE experiment ENCSR000AFX. The libraries contained in this experiment come from human fetal occipital lobe tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size |
|---|---|
| Author: | Thomas Gingeras, CSHL |
sncRNAs in this Library
| Precursor Transcript ID | sncRNA Name | sncRNA position in precursor | Expression | Expression Fraction | Expression (CPM) | Prominence | Transcript Name | Transcript Type | Biosample |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000387372.1 | ENST00000387372.1_1_30_+ | 1–30 | 342.79 | 7.22 | 0.73 | 62.33 | MT-TQ-201 | Mt tRNA | occipital lobe (Tissue) |
| ENST00000387372.1 | ENST00000387372.1_1_55_+ | 1–55 | 9.00 | 0.19 | 0.02 | 100.0 | MT-TQ-201 | Mt tRNA | occipital lobe (Tissue) |
| ENST00000387372.1 | ENST00000387372.1_1_36_+ | 1–36 | 1223.00 | 25.77 | 2.59 | 83.88 | MT-TQ-201 | Mt tRNA | occipital lobe (Tissue) |
| ENST00000387372.1 | ENST00000387372.1_1_32_+ | 1–32 | 1115.89 | 23.51 | 2.36 | 73.66 | MT-TQ-201 | Mt tRNA | occipital lobe (Tissue) |
| ENST00000387377.1 | ENST00000387377.1_1_51_+ | 1–51 | 546.00 | 11.64 | 1.16 | 100.0 | MT-TM-201 | Mt tRNA | occipital lobe (Tissue) |
| ENST00000387377.1 | ENST00000387377.1_1_31_+ | 1–31 | 1276.00 | 27.21 | 2.70 | 88.8 | MT-TM-201 | Mt tRNA | occipital lobe (Tissue) |
| ENST00000387405.1 | ENST00000387405.1_1_24_+ | 1–24 | 145.00 | 18.08 | 0.31 | 100.0 | MT-TC-201 | Mt tRNA | occipital lobe (Tissue) |
| ENST00000387409.1 | ENST00000387409.1_1_50_+ | 1–50 | 7.00 | 0.04 | 0.01 | 100.0 | MT-TY-201 | Mt tRNA | occipital lobe (Tissue) |
| ENST00000387409.1 | ENST00000387409.1_1_56_+ | 1–56 | 98.00 | 0.59 | 0.21 | 100.0 | MT-TY-201 | Mt tRNA | occipital lobe (Tissue) |
| ENST00000387409.1 | ENST00000387409.1_1_65_+ | 1–65 | 2393.00 | 14.32 | 5.07 | 100.0 | MT-TY-201 | Mt tRNA | occipital lobe (Tissue) |
| ENST00000387409.1 | ENST00000387409.1_1_28_+ | 1–28 | 153.00 | 0.92 | 0.32 | 100.0 | MT-TY-201 | Mt tRNA | occipital lobe (Tissue) |
| ENST00000387409.1 | ENST00000387409.1_1_32_+ | 1–32 | 1248.00 | 7.47 | 2.64 | 15.34 | MT-TY-201 | Mt tRNA | occipital lobe (Tissue) |
| ENST00000387409.1 | ENST00000387409.1_1_37_+ | 1–37 | 4244.00 | 25.40 | 8.98 | 83.68 | MT-TY-201 | Mt tRNA | occipital lobe (Tissue) |
| ENST00000387419.1 | ENST00000387419.1_1_51_+ | 1–51 | 7.00 | 3.40 | 0.01 | 100.0 | MT-TD-201 | Mt tRNA | occipital lobe (Tissue) |
| ENST00000387421.1 | ENST00000387421.1_1_58_+ | 1–58 | 1218.00 | 19.92 | 2.58 | 100.0 | MT-TK-201 | Mt tRNA | occipital lobe (Tissue) |
| ENST00000387421.1 | ENST00000387421.1_1_52_+ | 1–52 | 1888.00 | 30.88 | 4.00 | 100.0 | MT-TK-201 | Mt tRNA | occipital lobe (Tissue) |
| ENST00000387421.1 | ENST00000387421.1_1_28_+ | 1–28 | 194.00 | 3.17 | 0.41 | 100.0 | MT-TK-201 | Mt tRNA | occipital lobe (Tissue) |
| ENST00000387421.1 | ENST00000387421.1_1_31_+ | 1–31 | 27.00 | 0.44 | 0.06 | 100.0 | MT-TK-201 | Mt tRNA | occipital lobe (Tissue) |
| ENST00000387449.1 | ENST00000387449.1_1_26_+ | 1–26 | 290.00 | 4.46 | 0.61 | 100.0 | MT-TS2-201 | Mt tRNA | occipital lobe (Tissue) |
| ENST00000387449.1 | ENST00000387449.1_1_53_+ | 1–53 | 180.00 | 2.77 | 0.38 | 100.0 | MT-TS2-201 | Mt tRNA | occipital lobe (Tissue) |
| ENST00000387449.1 | ENST00000387449.1_1_20_+ | 1–20 | 424.00 | 6.52 | 0.90 | 71.62 | MT-TS2-201 | Mt tRNA | occipital lobe (Tissue) |
| ENST00000387456.1 | ENST00000387456.1_1_31_+ | 1–31 | 555.00 | 26.73 | 1.17 | 100.0 | MT-TL2-201 | Mt tRNA | occipital lobe (Tissue) |
| ENST00000387459.1 | ENST00000387459.1_1_62_+ | 1–62 | 643.00 | 0.22 | 1.36 | 76.73 | MT-TE-201 | Mt tRNA | occipital lobe (Tissue) |
| ENST00000387459.1 | ENST00000387459.1_40_67_+ | 40–67 | 209.00 | 0.07 | 0.44 | 45.34 | MT-TE-201 | Mt tRNA | occipital lobe (Tissue) |
| ENST00000387459.1 | ENST00000387459.1_39_69_+ | 39–69 | 252.00 | 0.09 | 0.53 | 60.72 | MT-TE-201 | Mt tRNA | occipital lobe (Tissue) |