ENCFF001RMD

Library Details

Organism: Homo Sapiens
Biosample: uterus (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGH
Description: Part of ENCODE experiment ENCSR000AGH. The libraries contained in this experiment come from human fetal uterus tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000364809.1 ENST00000364809.1_2_81_+ 2–81 271.00 31.01 0.45 100.0 SNORD115-15-201 snoRNA uterus (Tissue)
ENST00000364830.3 ENST00000364830.3_3_67_+ 3–67 116.00 7.20 0.19 100.0 SNORD113-3-201 snoRNA uterus (Tissue)
ENST00000364884.1 ENST00000364884.1_1_66_+ 1–66 10459.00 56.76 17.30 100.0 SNORD52-201 snoRNA uterus (Tissue)
ENST00000364915.1 ENST00000364915.1_2_74_+ 2–74 4272.00 27.07 7.07 50.37 SNORD117-201 snoRNA uterus (Tissue)
ENST00000364915.1 ENST00000364915.1_1_76_+ 1–76 4209.00 26.67 6.96 57.67 SNORD117-201 snoRNA uterus (Tissue)
ENST00000364969.1 ENST00000364969.1_3_71_+ 3–71 32649.00 80.40 54.01 97.68 SNORD114-3-201 snoRNA uterus (Tissue)
ENST00000364969.1 ENST00000364969.1_4_62_+ 4–62 1043.00 2.57 1.73 100.0 SNORD114-3-201 snoRNA uterus (Tissue)
ENST00000364969.1 ENST00000364969.1_38_71_+ 38–71 2360.00 5.81 3.90 100.0 SNORD114-3-201 snoRNA uterus (Tissue)
ENST00000364991.1 ENST00000364991.1_17_30_+ 17–30 48.00 1.99 0.08 100.0 RNA5SP298-201 rRNA pseudogene uterus (Tissue)
ENST00000365037.1 ENST00000365037.1_2_82_+ 2–82 368.00 40.62 0.61 100.0 SNORD115-38-201 snoRNA uterus (Tissue)
ENST00000365073.1 ENST00000365073.1_2_81_+ 2–81 527.00 46.11 0.87 100.0 SNORD115-10-201 snoRNA uterus (Tissue)
ENST00000365080.1 ENST00000365080.1_3_67_+ 3–67 9301.00 75.16 15.39 100.0 SNORD113-9-201 snoRNA uterus (Tissue)
ENST00000365099.1 ENST00000365099.1_2_82_+ 2–82 130.00 62.20 0.22 100.0 SNORD115-20-201 snoRNA uterus (Tissue)
ENST00000365161.1 ENST00000365161.1_1_41_+ 1–41 889.00 1.19 1.47 100.0 SNORD38A-201 snoRNA uterus (Tissue)
ENST00000365161.1 ENST00000365161.1_1_68_+ 1–68 67961.00 91.00 112.43 100.0 SNORD38A-201 snoRNA uterus (Tissue)
ENST00000365161.1 ENST00000365161.1_1_38_+ 1–38 2031.00 2.72 3.36 100.0 SNORD38A-201 snoRNA uterus (Tissue)
ENST00000365178.1 ENST00000365178.1_4_67_+ 4–67 21643.00 88.63 35.80 98.28 SNORD114-20-201 snoRNA uterus (Tissue)
ENST00000365328.1 ENST00000365328.1_273_331_+ 273–331 1561.00 2.64 2.58 62.69 7SK.1-201 misc RNA uterus (Tissue)
ENST00000365328.1 ENST00000365328.1_260_331_+ 260–331 762.00 1.29 1.26 100.0 7SK.1-201 misc RNA uterus (Tissue)
ENST00000365328.1 ENST00000365328.1_1_76_+ 1–76 5016.00 8.49 8.30 100.0 7SK.1-201 misc RNA uterus (Tissue)
ENST00000365328.1 ENST00000365328.1_246_331_+ 246–331 4210.00 7.13 6.96 100.0 7SK.1-201 misc RNA uterus (Tissue)
ENST00000365328.1 ENST00000365328.1_1_63_+ 1–63 3057.00 5.17 5.06 68.13 7SK.1-201 misc RNA uterus (Tissue)
ENST00000365328.1 ENST00000365328.1_282_331_+ 282–331 61.00 0.10 0.10 100.0 7SK.1-201 misc RNA uterus (Tissue)
ENST00000365328.1 ENST00000365328.1_238_331_+ 238–331 5481.00 9.28 9.07 100.0 7SK.1-201 misc RNA uterus (Tissue)
ENST00000365328.1 ENST00000365328.1_277_331_+ 277–331 5413.00 9.16 8.95 85.35 7SK.1-201 misc RNA uterus (Tissue)