ENCFF001RMD

Library Details

Organism: Homo Sapiens
Biosample: uterus (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGH
Description: Part of ENCODE experiment ENCSR000AGH. The libraries contained in this experiment come from human fetal uterus tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_8_53_+ 8–53 5.00 0.16 0.01 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA uterus (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_17_54_+ 17–54 11.00 0.36 0.02 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA uterus (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_1_34_+ 1–34 44.00 1.43 0.07 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA uterus (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_1_49_+ 1–49 72.00 2.34 0.12 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA uterus (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_34_53_+ 34–53 4.00 0.13 0.01 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA uterus (Tissue)
TRNA-TRANSCRIPT-CHR17-8125746 tRNA-transcript-chr17-8125746_1_52_+ 1–52 7505.00 1.37 12.42 88.84 TRNA-TRANSCRIPT-CHR17-8125746 Gly tRNA uterus (Tissue)
TRNA-TRANSCRIPT-CHR17-8125746 tRNA-transcript-chr17-8125746_13_32_+ 13–32 1321.00 0.24 2.19 66.45 TRNA-TRANSCRIPT-CHR17-8125746 Gly tRNA uterus (Tissue)
TRNA-TRANSCRIPT-CHR17-8125746 tRNA-transcript-chr17-8125746_10_32_+ 10–32 447.00 0.08 0.74 51.2 TRNA-TRANSCRIPT-CHR17-8125746 Gly tRNA uterus (Tissue)
TRNA-TRANSCRIPT-CHR17-8222238 tRNA-transcript-chr17-8222238_1_33_+ 1–33 2422.00 9.99 4.01 27.09 TRNA-TRANSCRIPT-CHR17-8222238 Asp tRNA uterus (Tissue)
TRNA-TRANSCRIPT-CHR1-7930279 tRNA-transcript-chr1-7930279_1_33_+ 1–33 7496.00 97.68 12.40 100.0 TRNA-TRANSCRIPT-CHR1-7930279 Pseudo tRNA uterus (Tissue)
TRNA-TRANSCRIPT-CHR19-45478602 tRNA-transcript-chr19-45478602_1_37_+ 1–37 387.00 30.52 0.64 94.16 TRNA-TRANSCRIPT-CHR19-45478602 SeC(e) tRNA uterus (Tissue)
TRNA-TRANSCRIPT-CHR20-45322361 tRNA-transcript-chr20-45322361_1_33_+ 1–33 1201.00 87.66 1.99 100.0 TRNA-TRANSCRIPT-CHR20-45322361 Pseudo tRNA uterus (Tissue)
TRNA-TRANSCRIPT-CHR21-17454789 tRNA-transcript-chr21-17454789_1_52_+ 1–52 154.00 0.30 0.25 14.39 TRNA-TRANSCRIPT-CHR21-17454789 Gly tRNA uterus (Tissue)
TRNA-TRANSCRIPT-CHR21-17454789 tRNA-transcript-chr21-17454789_3_52_+ 3–52 916.00 1.77 1.52 85.61 TRNA-TRANSCRIPT-CHR21-17454789 Gly tRNA uterus (Tissue)
TRNA-TRANSCRIPT-CHR21-17454789 tRNA-transcript-chr21-17454789_1_32_+ 1–32 28481.00 55.17 47.12 73.63 TRNA-TRANSCRIPT-CHR21-17454789 Gly tRNA uterus (Tissue)
TRNA-TRANSCRIPT-CHR2-130337128 tRNA-transcript-chr2-130337128_1_33_+ 1–33 17525.27 32.08 28.99 40.99 TRNA-TRANSCRIPT-CHR2-130337128 Glu tRNA uterus (Tissue)
TRNA-TRANSCRIPT-CHR2-130337128 tRNA-transcript-chr2-130337128_1_28_+ 1–28 1859.00 3.40 3.08 84.35 TRNA-TRANSCRIPT-CHR2-130337128 Glu tRNA uterus (Tissue)
TRNA-TRANSCRIPT-CHR2-130337128 tRNA-transcript-chr2-130337128_1_35_+ 1–35 30170.23 55.23 49.91 65.93 TRNA-TRANSCRIPT-CHR2-130337128 Glu tRNA uterus (Tissue)
TRNA-TRANSCRIPT-CHR2-203364408 tRNA-transcript-chr2-203364408_2_32_+ 2–32 200611.00 93.37 331.87 96.81 TRNA-TRANSCRIPT-CHR2-203364408 Pseudo tRNA uterus (Tissue)
TRNA-TRANSCRIPT-CHR3-104160680 tRNA-transcript-chr3-104160680_12_33_+ 12–33 1665.00 19.08 2.75 100.0 TRNA-TRANSCRIPT-CHR3-104160680 Pseudo tRNA uterus (Tissue)
TRNA-TRANSCRIPT-CHR5-181188854 tRNA-transcript-chr5-181188854_1_32_+ 1–32 6581.00 43.91 10.89 77.84 TRNA-TRANSCRIPT-CHR5-181188854 Pro tRNA uterus (Tissue)
TRNA-TRANSCRIPT-CHR5-181218270 tRNA-transcript-chr5-181218270_1_39_+ 1–39 154.00 0.00 0.25 100.0 TRNA-TRANSCRIPT-CHR5-181218270 Val tRNA uterus (Tissue)
TRNA-TRANSCRIPT-CHR6-125780247 tRNA-transcript-chr6-125780247_1_42_+ 1–42 138.00 0.01 0.23 37.1 TRNA-TRANSCRIPT-CHR6-125780247 Glu tRNA uterus (Tissue)
TRNA-TRANSCRIPT-CHR6-144216547 tRNA-transcript-chr6-144216547_1_50_+ 1–50 705.00 56.04 1.17 100.0 TRNA-TRANSCRIPT-CHR6-144216547 Leu tRNA uterus (Tissue)
TRNA-TRANSCRIPT-CHR6-26311196 tRNA-transcript-chr6-26311196_1_53_+ 1–53 37.00 3.70 0.06 100.0 TRNA-TRANSCRIPT-CHR6-26311196 Gln tRNA uterus (Tissue)