ENCFF001RMD

Library Details

Organism: Homo Sapiens
Biosample: uterus (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGH
Description: Part of ENCODE experiment ENCSR000AGH. The libraries contained in this experiment come from human fetal uterus tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000668419.1 ENST00000668419.1_2_92_+ 2–92 120841.00 21.45 199.91 84.2 SNHG14-315 lncRNA uterus (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1322_+ 1278–1322 2727.00 0.90 4.51 100.0 SNHG5-273 lncRNA uterus (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1351_+ 1278–1351 61092.43 20.20 101.07 28.0 SNHG5-273 lncRNA uterus (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1337_+ 1278–1337 289.00 0.10 0.48 100.0 SNHG5-273 lncRNA uterus (Tissue)
ENST00000668505.1 ENST00000668505.1_988_1033_+ 988–1033 1097.00 0.36 1.81 100.0 SNHG5-273 lncRNA uterus (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1353_+ 1278–1353 177018.36 58.54 292.84 74.1 SNHG5-273 lncRNA uterus (Tissue)
ENST00000668505.1 ENST00000668505.1_988_1056_+ 988–1056 23093.00 7.64 38.20 87.4 SNHG5-273 lncRNA uterus (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1315_+ 1278–1315 285.00 0.09 0.47 100.0 SNHG5-273 lncRNA uterus (Tissue)
ENST00000668505.1 ENST00000668505.1_1279_1308_+ 1279–1308 3643.00 1.20 6.03 100.0 SNHG5-273 lncRNA uterus (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1340_+ 1278–1340 114.00 0.04 0.19 100.0 SNHG5-273 lncRNA uterus (Tissue)
ENST00000668505.1 ENST00000668505.1_1272_1352_+ 1272–1352 2.00 0.00 0.00 100.0 SNHG5-273 lncRNA uterus (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1361_+ 1278–1361 2104.00 0.70 3.48 99.76 SNHG5-273 lncRNA uterus (Tissue)
ENST00000669673.1 ENST00000669673.1_3794_3884_+ 3794–3884 4369.00 15.13 7.23 81.44 SNHG14-323 lncRNA uterus (Tissue)
ENST00000670680.1 ENST00000670680.1_34_69_+ 34–69 3354.00 0.88 5.55 67.24 MEG8-251 lncRNA uterus (Tissue)
ENST00000670680.1 ENST00000670680.1_2_69_+ 2–69 347728.00 90.85 575.25 99.68 MEG8-251 lncRNA uterus (Tissue)
ENST00000670680.1 ENST00000670680.1_36_69_+ 36–69 2299.00 0.60 3.80 44.39 MEG8-251 lncRNA uterus (Tissue)
ENST00000670680.1 ENST00000670680.1_1539_1602_+ 1539–1602 14431.00 3.77 23.87 92.23 MEG8-251 lncRNA uterus (Tissue)
ENST00000670680.1 ENST00000670680.1_10_70_+ 10–70 1003.00 0.26 1.66 100.0 MEG8-251 lncRNA uterus (Tissue)
ENST00000670697.1 ENST00000670697.1_233_310_+ 233–310 44868.00 71.58 74.23 92.73 SNHG14-336 lncRNA uterus (Tissue)
ENST00000670697.1 ENST00000670697.1_232_313_+ 232–313 13899.00 22.17 22.99 42.4 SNHG14-336 lncRNA uterus (Tissue)
ENST00000671491.1 ENST00000671491.1_1778_1868_+ 1778–1868 25636.00 68.53 42.41 94.79 SNHG14-341 lncRNA uterus (Tissue)
ENST00000676514.1 ENST00000676514.1_1978_2054_+ 1978–2054 1339.00 25.56 2.22 100.0 NCL-211 retained intron uterus (Tissue)
ENST00000685142.3 ENST00000685142.3_1449_1480_+ 1449–1480 10.00 0.43 0.02 100.0 LINC02739-203 lncRNA uterus (Tissue)
ENST00000685142.3 ENST00000685142.3_1409_1423_+ 1409–1423 7.00 0.30 0.01 12.28 LINC02739-203 lncRNA uterus (Tissue)
ENST00000685142.3 ENST00000685142.3_1421_1436_+ 1421–1436 393.00 16.96 0.65 100.0 LINC02739-203 lncRNA uterus (Tissue)