ENCFF001RMD

Library Details

Organism: Homo Sapiens
Biosample: uterus (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGH
Description: Part of ENCODE experiment ENCSR000AGH. The libraries contained in this experiment come from human fetal uterus tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000685142.3 ENST00000685142.3_1409_1440_+ 1409–1440 188.00 8.11 0.31 100.0 LINC02739-203 lncRNA uterus (Tissue)
ENST00000685142.3 ENST00000685142.3_1405_1444_+ 1405–1444 7.00 0.30 0.01 100.0 LINC02739-203 lncRNA uterus (Tissue)
ENST00000685142.3 ENST00000685142.3_1409_1421_+ 1409–1421 50.00 2.16 0.08 87.72 LINC02739-203 lncRNA uterus (Tissue)
ENST00000685227.3 ENST00000685227.3_1036_1055_+ 1036–1055 21.00 87.50 0.03 100.0 MIR124-1HG-216 lncRNA uterus (Tissue)
ENST00000685307.3 ENST00000685307.3_1198_1226_+ 1198–1226 251.00 8.78 0.42 100.0 SNHG10-212 lncRNA uterus (Tissue)
ENST00000686899.3 ENST00000686899.3_568_649_+ 568–649 82959.03 41.83 137.24 44.44 SNHG19-202 lncRNA uterus (Tissue)
ENST00000686899.3 ENST00000686899.3_568_647_+ 568–647 103818.90 52.35 171.75 65.83 SNHG19-202 lncRNA uterus (Tissue)
ENST00000686899.3 ENST00000686899.3_562_648_+ 562–648 23.31 0.01 0.04 86.33 SNHG19-202 lncRNA uterus (Tissue)
ENST00000686899.3 ENST00000686899.3_562_650_+ 562–650 1.44 0.00 0.00 72.05 SNHG19-202 lncRNA uterus (Tissue)
ENST00000688264.3 ENST00000688264.3_548_571_+ 548–571 7503.00 19.52 12.41 100.0 MIR222HG-206 lncRNA uterus (Tissue)
ENST00000688264.3 ENST00000688264.3_1402_1424_+ 1402–1424 22086.00 57.46 36.54 84.5 MIR222HG-206 lncRNA uterus (Tissue)
ENST00000688264.3 ENST00000688264.3_1362_1387_+ 1362–1387 189.00 0.49 0.31 100.0 MIR222HG-206 lncRNA uterus (Tissue)
ENST00000688371.3 ENST00000688371.3_313_335_+ 313–335 1.00 0.75 0.00 33.33 MIR302CHG-205 lncRNA uterus (Tissue)
ENST00000688371.3 ENST00000688371.3_190_212_+ 190–212 11.34 8.53 0.02 32.4 MIR302CHG-205 lncRNA uterus (Tissue)
ENST00000688371.3 ENST00000688371.3_313_333_+ 313–333 2.00 1.50 0.00 66.67 MIR302CHG-205 lncRNA uterus (Tissue)
ENST00000688371.3 ENST00000688371.3_190_210_+ 190–210 19.00 14.29 0.03 59.38 MIR302CHG-205 lncRNA uterus (Tissue)
ENST00000688371.3 ENST00000688371.3_493_514_+ 493–514 16.00 12.03 0.03 100.0 MIR302CHG-205 lncRNA uterus (Tissue)
ENST00000688371.3 ENST00000688371.3_673_694_+ 673–694 19.00 14.29 0.03 100.0 MIR302CHG-205 lncRNA uterus (Tissue)
ENST00000688371.3 ENST00000688371.3_458_478_+ 458–478 39.00 29.32 0.06 97.5 MIR302CHG-205 lncRNA uterus (Tissue)
ENST00000688371.3 ENST00000688371.3_458_481_+ 458–481 2.00 1.50 0.00 15.38 MIR302CHG-205 lncRNA uterus (Tissue)
ENST00000697734.1 ENST00000697734.1_1838_1871_+ 1838–1871 469.00 34.16 0.78 100.0 RPSA-216 retained intron uterus (Tissue)
ENST00000697879.1 ENST00000697879.1_547_564_+ 547–564 4000.00 1.29 6.62 59.18 MIR99AHG-370 lncRNA uterus (Tissue)
ENST00000697879.1 ENST00000697879.1_547_568_+ 547–568 294806.00 95.15 487.70 98.35 MIR99AHG-370 lncRNA uterus (Tissue)
ENST00000699245.1 ENST00000699245.1_739_776_+ 739–776 152.00 77.55 0.25 100.0 HPS4-237 retained intron uterus (Tissue)
ENST00000699458.1 ENST00000699458.1_1475_1492_+ 1475–1492 2743.00 87.50 4.54 100.0 MEG8-253 lncRNA uterus (Tissue)