ENCFF001RMD

Library Details

Organism: Homo Sapiens
Biosample: uterus (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGH
Description: Part of ENCODE experiment ENCSR000AGH. The libraries contained in this experiment come from human fetal uterus tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000668048.2 ENST00000668048.2_523_570_+ 523–570 789.00 0.02 1.31 100.0 SNHG1-248 lncRNA uterus (Tissue)
ENST00000668048.2 ENST00000668048.2_847_874_+ 847–874 1269.00 0.04 2.10 100.0 SNHG1-248 lncRNA uterus (Tissue)
ENST00000668048.2 ENST00000668048.2_523_549_+ 523–549 993.00 0.03 1.64 100.0 SNHG1-248 lncRNA uterus (Tissue)
ENST00000668048.2 ENST00000668048.2_1194_1268_+ 1194–1268 3754.00 0.11 6.21 100.0 SNHG1-248 lncRNA uterus (Tissue)
ENST00000668048.2 ENST00000668048.2_523_584_+ 523–584 791.00 0.02 1.31 100.0 SNHG1-248 lncRNA uterus (Tissue)
ENST00000668048.2 ENST00000668048.2_287_322_+ 287–322 840.00 0.02 1.39 100.0 SNHG1-248 lncRNA uterus (Tissue)
ENST00000668048.2 ENST00000668048.2_2157_2173_+ 2157–2173 25926.00 0.74 42.89 100.0 SNHG1-248 lncRNA uterus (Tissue)
ENST00000668048.2 ENST00000668048.2_258_296_+ 258–296 209.00 0.01 0.35 100.0 SNHG1-248 lncRNA uterus (Tissue)
ENST00000668048.2 ENST00000668048.2_2184_2223_+ 2184–2223 4064.00 0.12 6.72 100.0 SNHG1-248 lncRNA uterus (Tissue)
ENST00000668048.2 ENST00000668048.2_258_324_+ 258–324 62099.00 1.78 102.73 66.69 SNHG1-248 lncRNA uterus (Tissue)
ENST00000668048.2 ENST00000668048.2_2507_2560_+ 2507–2560 3125.00 0.09 5.17 100.0 SNHG1-248 lncRNA uterus (Tissue)
ENST00000668048.2 ENST00000668048.2_524_594_+ 524–594 496783.00 14.23 821.83 97.88 SNHG1-248 lncRNA uterus (Tissue)
ENST00000668048.2 ENST00000668048.2_2514_2560_+ 2514–2560 7143.00 0.20 11.82 100.0 SNHG1-248 lncRNA uterus (Tissue)
ENST00000668048.2 ENST00000668048.2_1936_1982_+ 1936–1982 1942.00 0.06 3.21 100.0 SNHG1-248 lncRNA uterus (Tissue)
ENST00000668048.2 ENST00000668048.2_517_596_+ 517–596 7.00 0.00 0.01 100.0 SNHG1-248 lncRNA uterus (Tissue)
ENST00000668048.2 ENST00000668048.2_806_874_+ 806–874 267321.00 7.66 442.23 100.0 SNHG1-248 lncRNA uterus (Tissue)
ENST00000668048.2 ENST00000668048.2_1953_1982_+ 1953–1982 8850.00 0.25 14.64 81.35 SNHG1-248 lncRNA uterus (Tissue)
ENST00000668048.2 ENST00000668048.2_523_579_+ 523–579 1572.96 0.05 2.60 53.59 SNHG1-248 lncRNA uterus (Tissue)
ENST00000668048.2 ENST00000668048.2_565_594_+ 565–594 878.00 0.03 1.45 100.0 SNHG1-248 lncRNA uterus (Tissue)
ENST00000668048.2 ENST00000668048.2_1949_1982_+ 1949–1982 9643.00 0.28 15.95 68.86 SNHG1-248 lncRNA uterus (Tissue)
ENST00000668048.2 ENST00000668048.2_2160_2223_+ 2160–2223 2272.00 0.07 3.76 100.0 SNHG1-248 lncRNA uterus (Tissue)
ENST00000668048.2 ENST00000668048.2_1921_1978_+ 1921–1978 12032.00 0.34 19.90 100.0 SNHG1-248 lncRNA uterus (Tissue)
ENST00000668048.2 ENST00000668048.2_1194_1265_+ 1194–1265 313.00 0.01 0.52 100.0 SNHG1-248 lncRNA uterus (Tissue)
ENST00000668419.1 ENST00000668419.1_3471_3561_+ 3471–3561 180102.00 31.97 297.94 100.0 SNHG14-315 lncRNA uterus (Tissue)
ENST00000668419.1 ENST00000668419.1_1471_1561_+ 1471–1561 183086.00 32.50 302.88 91.76 SNHG14-315 lncRNA uterus (Tissue)